RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 GPATCH1Q9BRR8 931 aaKnown RBP14.96□□□□□ -0.01
DDX55-202ENST00000354291 ETNK1Q9HBU6 452 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 SCN2AQ99250 2005 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 NBEAL1Q6ZS30 2694 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 A0A0A6YYC8 382 aaPredicted RBP14.95□□□□□ -0.02
DDX55-202ENST00000354291 GABRR3A8MPY1 467 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 F8W8V4 182 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 I3L1I5 382 aaPredicted RBP14.95□□□□□ -0.02
DDX55-202ENST00000354291 KLK8O60259 260 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 IFNB1P01574 187 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 RPN2P04844 631 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 OR56A5P0C7T3 313 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 MAT1AQ00266 395 aaKnown RBP14.95□□□□□ -0.02
DDX55-202ENST00000354291 PRTGQ2VWP7 1150 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 LRRC8BQ6P9F7 803 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 PACS1Q6VY07 963 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 PPP1R21Q6ZMI0 780 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 LANCL3Q6ZV70 420 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 SLC13A5Q86YT5 568 aaPredicted RBP14.95□□□□□ -0.02
DDX55-202ENST00000354291 VRK3Q8IV63 474 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 DCUN1D3Q8IWE4 304 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 ZC3H7AQ8IWR0 971 aaKnown RBP14.95□□□□□ -0.02
DDX55-202ENST00000354291 RPRMLQ8N4K4 120 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 WFDC11Q8NEX6 87 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 SPATA3Q8NHX4 192 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 C18orf12Q96KH6 178 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 CLEC4MQ9H2X3 399 aaPredicted RBP14.95□□□□□ -0.02
DDX55-202ENST00000354291 RIMKLBQ9ULI2 386 aa14.95□□□□□ -0.02
DDX55-202ENST00000354291 FBN1P35555 2871 aaKnown RBP14.95□□□□□ -0.02
DDX55-202ENST00000354291 NEURL1O76050 574 aa14.94□□□□□ -0.02
DDX55-202ENST00000354291 FKBP9O95302 570 aa14.94□□□□□ -0.02
DDX55-202ENST00000354291 INHBBP09529 407 aa14.94□□□□□ -0.02
DDX55-202ENST00000354291 ADRA1DP25100 572 aa14.94□□□□□ -0.02
DDX55-202ENST00000354291 SNTB1Q13884 538 aaKnown RBP14.94□□□□□ -0.02
DDX55-202ENST00000354291 RPS6KA1Q15418 735 aa14.94□□□□□ -0.02
DDX55-202ENST00000354291 HKDC1Q2TB90 917 aa14.94□□□□□ -0.02
DDX55-202ENST00000354291 MINDY4Q4G0A6 757 aa14.94□□□□□ -0.02
DDX55-202ENST00000354291 CCDC38Q502W7 563 aa14.94□□□□□ -0.02
DDX55-202ENST00000354291 TTC23LQ6PF05 361 aa14.94□□□□□ -0.02
DDX55-202ENST00000354291 SLC22A15Q8IZD6 547 aa14.94□□□□□ -0.02
DDX55-202ENST00000354291 CSNK1A1LQ8N752 337 aa14.94□□□□□ -0.02
DDX55-202ENST00000354291 CCDC89Q8N998 374 aa14.94□□□□□ -0.02
DDX55-202ENST00000354291 OR2L3Q8NG85 312 aa14.94□□□□□ -0.02
DDX55-202ENST00000354291 GOT1L1Q8NHS2 421 aaPredicted RBP14.94□□□□□ -0.02
DDX55-202ENST00000354291 MVB12AQ96EY5 273 aa14.94□□□□□ -0.02
DDX55-202ENST00000354291 SEC16BQ96JE7 1060 aa14.94□□□□□ -0.02
DDX55-202ENST00000354291 OLFM1Q99784 485 aa14.94□□□□□ -0.02
DDX55-202ENST00000354291 ZFYVE21Q9BQ24 234 aa14.94□□□□□ -0.02
DDX55-202ENST00000354291 VN1R1Q9GZP7 353 aa14.94□□□□□ -0.02
DDX55-202ENST00000354291 RUVBL1Q9Y265 456 aaKnown RBP14.94□□□□□ -0.02
DDX55-202ENST00000354291 ATRQ13535 2644 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 CCDC162PA2VCL2 907 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 OR2W5A6NFC9 320 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 TFECO14948 347 aaPredicted RBP14.93□□□□□ -0.02
DDX55-202ENST00000354291 SLC25A12O75746 678 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 PDE9AO76083 593 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 CCR7P32248 378 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 FOXN2P32314 431 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 PPARGP37231 505 aaPredicted RBP14.93□□□□□ -0.02
DDX55-202ENST00000354291 RFC3P40938 356 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 YBX1P67809 324 aaKnown RBP14.93□□□□□ -0.02
DDX55-202ENST00000354291 TSTD2Q5T7W7 516 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 MEI1Q5TIA1 1274 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 AFTPHQ6ULP2 937 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 UNC5DQ6UXZ4 953 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 RNF44Q7L0R7 432 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 OR10Q1Q8NGQ4 319 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 OR13J1Q8NGT2 312 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 C1orf54Q8WWF1 131 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 PEX13Q92968 403 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 ARSGQ96EG1 525 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 TP63Q9H3D4 680 aaPredicted RBP14.93□□□□□ -0.02
DDX55-202ENST00000354291 CDCP1Q9H5V8 836 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 RAB6BQ9NRW1 208 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 PAK5Q9P286 719 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 C19orf25Q9UFG5 118 aaPredicted RBP14.93□□□□□ -0.02
DDX55-202ENST00000354291 L3MBTL1Q9Y468 752 aa14.93□□□□□ -0.02
DDX55-202ENST00000354291 OR51F1A6NGY5 319 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 FOXS1O43638 330 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 OR1I1O60431 355 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 PRMT3O60678 531 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 GOT2P00505 430 aaKnown RBP14.92□□□□□ -0.02
DDX55-202ENST00000354291 APRTP07741 180 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 EMP3P54852 163 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 DLX5P56178 289 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 NUP107P57740 925 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 SNX1Q13596 522 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 CCNG2Q16589 344 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 ZNF468Q5VIY5 522 aaPredicted RBP14.92□□□□□ -0.02
DDX55-202ENST00000354291 C4orf22Q6V702 233 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 CXXC5Q7LFL8 322 aaKnown RBP14.92□□□□□ -0.02
DDX55-202ENST00000354291 SLC5A8Q8N695 610 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 MYRIPQ8NFW9 859 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 OR6P1Q8NGX9 317 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 OR4L1Q8NH43 312 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 M1APQ8TC57 530 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 DPH7Q9BTV6 452 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 ACAT2Q9BWD1 397 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 DRC3Q9H069 523 aa14.92□□□□□ -0.02
DDX55-202ENST00000354291 RASSF1Q9NS23 344 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms