RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 CLCN4P51793 760 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 MPP7Q5T2T1 576 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 BROXQ5VW32 411 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 GALNT18Q6P9A2 607 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 TREML1Q86YW5 311 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 SLC6A17Q9H1V8 727 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 EPB41L1Q9H4G0 881 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 TPT1P8Q9HAU6 139 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 PDE10AQ9Y233 779 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 SDHDO14521 159 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 ARPC2O15144 300 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 FADS2O95864 444 aaKnown RBP13.26□□□□□ -0.29
SMC6-201ENST00000351948 CHRM5P08912 532 aaPredicted RBP13.26□□□□□ -0.29
SMC6-201ENST00000351948 DRD1P21728 446 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 RPS9P46781 194 aaKnown RBP13.26□□□□□ -0.29
SMC6-201ENST00000351948 HTR6P50406 440 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 TMEM164Q5U3C3 297 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 FAM91A1Q658Y4 838 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 NOXRED1Q6NXP6 359 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 CCDC103Q8IW40 242 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 NFKBIDQ8NI38 313 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 HLA-CQ95604 372 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 WBP2Q969T9 261 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 ZNF354BQ96LW1 612 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 PLEKHG4BQ96PX9 1271 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 ZIM2Q9NZV7 527 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 PTGFRNQ9P2B2 879 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.26□□□□□ -0.29
SMC6-201ENST00000351948 POLR2AP24928 1970 aaKnown RBP13.25□□□□□ -0.29
SMC6-201ENST00000351948 WASH4PA8MWX3 477 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 C9J4A7 227 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 M0QX08 132 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 GADD45GO95257 159 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 LAPTM4AQ15012 233 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 ZNF671Q8TAW3 534 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 ZSWIM3Q96MP5 696 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.25□□□□□ -0.29
SMC6-201ENST00000351948 KCNH6Q9H252 994 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 CLEC4EQ9ULY5 219 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 CDC14AQ9UNH5 594 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 MRPS7Q9Y2R9 242 aaKnown RBP13.25□□□□□ -0.29
SMC6-201ENST00000351948 FADS2P1A8MWK0 482 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 BCKDKO14874 412 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 ALPPP05187 535 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 DBTP11182 482 aaKnown RBP13.25□□□□□ -0.29
SMC6-201ENST00000351948 DNAJB13P59910 316 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 SH3BP2P78314 561 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 FBXO43Q4G163 708 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 GPR107Q5VW38 600 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 KBTBD2Q8IY47 623 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 SAMD14Q8IZD0 417 aaPredicted RBP13.25□□□□□ -0.29
SMC6-201ENST00000351948 RHEBL1Q8TAI7 183 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 THAP3Q8WTV1 239 aaPredicted RBP13.25□□□□□ -0.29
SMC6-201ENST00000351948 PRR11Q96HE9 360 aaPredicted RBP13.25□□□□□ -0.29
SMC6-201ENST00000351948 ZFRQ96KR1 1074 aaKnown RBP13.25□□□□□ -0.29
SMC6-201ENST00000351948 PRSS21Q9Y6M0 314 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 C2orf74A8MZ97 194 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 THRBP10828 461 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 MRPS15P82914 257 aaKnown RBP13.25□□□□□ -0.29
SMC6-201ENST00000351948 EMX2Q04743 252 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 TRIM16LQ309B1 348 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 Q6ZSR6 202 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 OR4N5Q8IXE1 308 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 GPR65Q8IYL9 337 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 OR13J1Q8NGT2 312 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 WDR60Q8WVS4 1066 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 ZNF689Q96CS4 500 aaPredicted RBP13.25□□□□□ -0.29
SMC6-201ENST00000351948 CENPNQ96H22 339 aaPredicted RBP13.25□□□□□ -0.29
SMC6-201ENST00000351948 Q96MT0 163 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 ZNF570Q96NI8 536 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 NCDNQ9UBB6 729 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 LHX3Q9UBR4 397 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 TCRBV5S1A1TA0A578 114 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 GPIP06744 558 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 HNRNPA2B1P22626 353 aaKnown RBP13.25□□□□□ -0.29
SMC6-201ENST00000351948 NR4A1P22736 598 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 SERPINB1P30740 379 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 CCT3P49368 545 aaKnown RBP13.25□□□□□ -0.29
SMC6-201ENST00000351948 OLR1P78380 273 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 DDI2Q5TDH0 399 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 CD200R1Q8TD46 325 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 PAIP1Q9H074 479 aaKnown RBP13.25□□□□□ -0.29
SMC6-201ENST00000351948 NOL6Q9H6R4 1146 aaKnown RBP13.25□□□□□ -0.29
SMC6-201ENST00000351948 COQ10BQ9H8M1 238 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 SPATA7Q9P0W8 599 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 SERTAD3Q9UJW9 196 aa13.25□□□□□ -0.29
SMC6-201ENST00000351948 A0A1W2PP18 115 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 IL3P08700 152 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 AGXTP21549 392 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 ITGB7P26010 798 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 CCKBRP32239 447 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 MYBPC1Q00872 1141 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 HHEXQ03014 270 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 ZNF763Q0D2J5 394 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 TARDBPQ13148 414 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMC6-201ENST00000351948 ZNF267Q14586 743 aaPredicted RBP13.24□□□□□ -0.29
SMC6-201ENST00000351948 DUOXA1Q1HG43 343 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 TRIM71Q2Q1W2 868 aaKnown RBP13.24□□□□□ -0.29
SMC6-201ENST00000351948 SLC44A4Q53GD3 710 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 PARM1Q6UWI2 310 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms