RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 THAP4Q8WY91 577 aa21.04■□□□□ 0.96
SNX3-202ENST00000349379 TSNARE1Q96NA8 513 aa21.04■□□□□ 0.96
SNX3-202ENST00000349379 SPNS1Q9H2V7 528 aa21.04■□□□□ 0.96
SNX3-202ENST00000349379 ANKZF1Q9H8Y5 726 aa21.04■□□□□ 0.96
SNX3-202ENST00000349379 WWOXQ9NZC7 414 aa21.04■□□□□ 0.96
SNX3-202ENST00000349379 NUDT4Q9NZJ9 180 aa21.04■□□□□ 0.96
SNX3-202ENST00000349379 GPN3Q9UHW5 284 aaPredicted RBP21.04■□□□□ 0.96
SNX3-202ENST00000349379 TLK1Q9UKI8 766 aa21.04■□□□□ 0.96
SNX3-202ENST00000349379 RNF112Q9ULX5 631 aa21.04■□□□□ 0.96
SNX3-202ENST00000349379 DYRK1BQ9Y463 629 aa21.04■□□□□ 0.96
SNX3-202ENST00000349379 IKBKGQ9Y6K9 419 aa21.04■□□□□ 0.96
SNX3-202ENST00000349379 EXOC1LA0A1B0GW35 172 aa21.03■□□□□ 0.96
SNX3-202ENST00000349379 FOXS1O43638 330 aa21.03■□□□□ 0.96
SNX3-202ENST00000349379 KRT38O76015 456 aa21.03■□□□□ 0.96
SNX3-202ENST00000349379 KLHL2O95198 593 aa21.03■□□□□ 0.96
SNX3-202ENST00000349379 MTHFD2P13995 350 aa21.03■□□□□ 0.96
SNX3-202ENST00000349379 CCR10P46092 362 aa21.03■□□□□ 0.96
SNX3-202ENST00000349379 OR1D4P47884 311 aa21.03■□□□□ 0.96
SNX3-202ENST00000349379 SNRPNP63162 240 aaKnown RBP21.03■□□□□ 0.96
SNX3-202ENST00000349379 MEF2AQ02078 507 aaPredicted RBP21.03■□□□□ 0.96
SNX3-202ENST00000349379 FAM83EQ2M2I3 478 aa21.03■□□□□ 0.96
SNX3-202ENST00000349379 NXPE4Q6UWF7 544 aa21.03■□□□□ 0.96
SNX3-202ENST00000349379 TAOK1Q7L7X3 1001 aa21.03■□□□□ 0.96
SNX3-202ENST00000349379 TMPRSS11BQ86T26 416 aa21.03■□□□□ 0.96
SNX3-202ENST00000349379 METTL27Q8N6F8 245 aaPredicted RBP21.03■□□□□ 0.96
SNX3-202ENST00000349379 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.03■□□□□ 0.96
SNX3-202ENST00000349379 SPSB2Q99619 263 aa21.03■□□□□ 0.96
SNX3-202ENST00000349379 SEMA4CQ9C0C4 833 aa21.03■□□□□ 0.96
SNX3-202ENST00000349379 WDR54Q9H977 334 aa21.03■□□□□ 0.96
SNX3-202ENST00000349379 CNOT10Q9H9A5 744 aaKnown RBP21.03■□□□□ 0.96
SNX3-202ENST00000349379 ZNF304Q9HCX3 659 aa21.03■□□□□ 0.96
SNX3-202ENST00000349379 GPRC5BQ9NZH0 403 aa21.03■□□□□ 0.96
SNX3-202ENST00000349379 FETUBQ9UGM5 382 aa21.03■□□□□ 0.96
SNX3-202ENST00000349379 PTRH2Q9Y3E5 179 aaKnown RBP21.03■□□□□ 0.96
SNX3-202ENST00000349379 IGLV3-12A0A075B6K2 115 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 VSTM2BA6NLU5 285 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 UMODP07911 640 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 SCTRP47872 440 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 POLE2P56282 527 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 CDC16Q13042 620 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 LY6DQ14210 128 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 SLC29A2Q14542 456 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 NKG7Q16617 165 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 TMEM214Q6NUQ4 689 aaKnown RBP21.02■□□□□ 0.96
SNX3-202ENST00000349379 ADGRD1Q6QNK2 874 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 ASPGQ86U10 573 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 APLFQ8IW19 511 aaPredicted RBP21.02■□□□□ 0.96
SNX3-202ENST00000349379 TMEM151BQ8IW70 566 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 CAMKVQ8NCB2 501 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 ZNF740Q8NDX6 193 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 UBTD2Q8WUN7 234 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 APOBEC4Q8WW27 367 aaKnown RBP21.02■□□□□ 0.96
SNX3-202ENST00000349379 ADNPQ9H2P0 1102 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 CD274Q9NZQ7 290 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 CDC14AQ9UNH5 594 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 MRPS2Q9Y399 296 aaKnown RBP21.02■□□□□ 0.96
SNX3-202ENST00000349379 MAU2Q9Y6X3 613 aa21.02■□□□□ 0.96
SNX3-202ENST00000349379 PIEZO2Q9H5I5 2752 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 TRIM49D1C9J1S8 452 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 UBXN8O00124 270 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 STK16O75716 305 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 FAM87AP0C7U9 286 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 GNAZP19086 355 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 FOLR3P41439 243 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 HSPA7P48741 367 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 FOXL2P58012 376 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 DSG2Q14126 1118 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 SSPNQ14714 243 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 ACAP2Q15057 778 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 NDUFA9Q16795 377 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 FBXO48Q5FWF7 155 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 SLCO4C1Q6ZQN7 724 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 PLD6Q8N2A8 252 aaKnown RBP21.01■□□□□ 0.95
SNX3-202ENST00000349379 EXT2Q93063 718 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 ESAMQ96AP7 390 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 ARHGAP9Q9BRR9 750 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 DRC3Q9H069 523 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 DNAJC11Q9NVH1 559 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 GEMIN8Q9NWZ8 242 aaKnown RBP21.01■□□□□ 0.95
SNX3-202ENST00000349379 COPG2Q9UBF2 871 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 CTSFQ9UBX1 484 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 TUBD1Q9UJT1 453 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 NXT1Q9UKK6 140 aaKnown RBP21.01■□□□□ 0.95
SNX3-202ENST00000349379 MAN2B2Q9Y2E5 1009 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 ASB1Q9Y576 335 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 BSNQ9UPA5 3926 aa21.01■□□□□ 0.95
SNX3-202ENST00000349379 DOCK10Q96BY6 2186 aa21■□□□□ 0.95
SNX3-202ENST00000349379 OR1F1O43749 312 aa21■□□□□ 0.95
SNX3-202ENST00000349379 KLK8O60259 260 aa21■□□□□ 0.95
SNX3-202ENST00000349379 STATHP02808 62 aa21■□□□□ 0.95
SNX3-202ENST00000349379 SNRPAP09012 282 aaKnown RBP21■□□□□ 0.95
SNX3-202ENST00000349379 AHRP35869 848 aa21■□□□□ 0.95
SNX3-202ENST00000349379 PWP1Q13610 501 aa21■□□□□ 0.95
SNX3-202ENST00000349379 TECRLQ5HYJ1 363 aa21■□□□□ 0.95
SNX3-202ENST00000349379 ATG9BQ674R7 924 aa21■□□□□ 0.95
SNX3-202ENST00000349379 RAB43Q86YS6 212 aa21■□□□□ 0.95
SNX3-202ENST00000349379 AMER3Q8N944 861 aa21■□□□□ 0.95
SNX3-202ENST00000349379 SLC13A3Q8WWT9 602 aa21■□□□□ 0.95
SNX3-202ENST00000349379 MACROD1Q9BQ69 325 aa21■□□□□ 0.95
SNX3-202ENST00000349379 AIF1LQ9BQI0 150 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms