RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 SGTAO43765 313 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 MAGP20916 626 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 TGM1P22735 817 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 RAE1P78406 368 aaKnown RBP17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 SRSF11Q05519 484 aaKnown RBP17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 SLC13A2Q13183 592 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 COX20Q5RI15 118 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 ANGPTL8Q6UXH0 198 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 Q6ZVL8 140 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 Q6ZVU0 165 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 USP45Q70EL2 814 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 OR4K1Q8NGD4 311 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 PSMA8Q8TAA3 256 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 WDR20Q8TBZ3 569 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 CD99L2Q8TCZ2 262 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 CSGALNACT1Q8TDX6 532 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 FEVQ99581 238 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 DUSP26Q9BV47 211 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 MIR1-1HGQ9H1L0 117 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 SH3BP4Q9P0V3 963 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 INSL5Q9Y5Q6 135 aa17.47■□□□□ 0.39
PTP4A3-202ENST00000349124 ANAPC1Q9H1A4 1944 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 OR2A25A4D2G3 310 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 ARHGEF33A8MVX0 844 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 EFCAB9A8MZ26 197 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 CXCR4P61073 352 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 ACSM2AQ08AH3 577 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 ACSM2BQ68CK6 577 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 FAHD1Q6P587 224 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 GPR155Q7Z3F1 870 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 THOC6Q86W42 341 aaKnown RBP17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 ELMOD1Q8N336 334 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 SYNPOQ8N3V7 929 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 SPPL2AQ8TCT8 520 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 TBC1D20Q96BZ9 403 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 PCDHB11Q9Y5F2 797 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 PABPN1LA6NDY0 278 aaKnown RBP17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 CSNK1DP48730 415 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 HNMTP50135 292 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 EPHB3P54753 998 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 SNRPD1P62314 119 aaKnown RBP17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 PRSS48Q7RTY5 328 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 HSD11B1LQ7Z5J1 315 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 SLC22A16Q86VW1 577 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 CCDC103Q8IW40 242 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 ECHDC3Q96DC8 303 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 SRRDQ9UH36 339 aa17.46■□□□□ 0.39
PTP4A3-202ENST00000349124 M0R082 166 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 HOXA2O43364 376 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 GRK5P34947 590 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 DGKEP52429 567 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 SFSWAPQ12872 951 aaKnown RBP17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 IER5LQ5T953 404 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 PLD3Q8IV08 490 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 FIBINQ8TAL6 211 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 ZHX1-C8orf76Q96EF9 292 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 MTG2Q9H4K7 406 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 FBXO8Q9NRD0 319 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 GPATCH2Q9NW75 528 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 SH3BP1Q9Y3L3 701 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 C5orf42Q9H799 3197 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 TRIM43BA6NCK2 446 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 SOD2P04179 222 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 POU2F1P14859 743 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 CYP2A7P20853 494 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 CA8P35219 290 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 MAPK8P45983 427 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 ITGA1P56199 1179 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 PROX2Q3B8N5 592 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 CDKL4Q5MAI5 379 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 FAM180BQ6P0A1 224 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 C22orf39Q6P5X5 142 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 SLC5A8Q8N695 610 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 OR8J2Q8NGG1 315 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 RAET1EQ8TD07 263 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 HPS1Q92902 700 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 COPS4Q9BT78 406 aa17.45■□□□□ 0.38
PTP4A3-202ENST00000349124 PRAMEF25A6NGN4 478 aa17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 SAP18O00422 153 aaKnown RBP17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 AOC2O75106 756 aa17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 C9P02748 559 aa17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 ANXA4P09525 319 aaPredicted RBP17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 ETFAP13804 333 aa17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 ETV3P41162 512 aa17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 BDKRB1P46663 353 aa17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 IDH2P48735 452 aaKnown RBP17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 ATN1P54259 1190 aaPredicted RBP17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 CYP4F2P78329 520 aa17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 RGNQ15493 299 aa17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 ZNF385BQ569K4 471 aa17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 TPGS2Q68CL5 300 aa17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 SIGLEC11Q96RL6 698 aa17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 DSN1Q9H410 356 aa17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 SGK2Q9HBY8 427 aa17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 ABCB10Q9NRK6 738 aa17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 MRPL17Q9NRX2 175 aaKnown RBP17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 RAD18Q9NS91 495 aa17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 EXO1Q9UQ84 846 aaKnown RBP17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 ERVW-1Q9UQF0 538 aa17.44■□□□□ 0.38
PTP4A3-202ENST00000349124 CCL26Q9Y258 94 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms