RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 MID2Q9UJV3 735 aa5.01□□□□□ -1.61
VCAM1-202ENST00000347652 CHMP2BQ9UQN3 213 aa5.01□□□□□ -1.61
VCAM1-202ENST00000347652 PRELID1Q9Y255 219 aa5.01□□□□□ -1.61
VCAM1-202ENST00000347652 KCTD3Q9Y597 815 aa5.01□□□□□ -1.61
VCAM1-202ENST00000347652 MYLKQ15746 1914 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 ZCWPW2A0A1B0GU75 182 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 PRR23AA6NEV1 266 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 C10orf142B7Z368 130 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 PSMD11O00231 422 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 RPP40O75818 363 aaKnown RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 TTC4O95801 387 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 GSTA2P09210 222 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 H2AFXP16104 143 aaPredicted RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 GM2AP17900 193 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 EGR1P18146 543 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 EPORP19235 508 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 CD40P25942 277 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 OXTRP30559 389 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 SOX18P35713 384 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 GATA4P43694 442 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 ARFIP2P53365 341 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 ADPRHP54922 357 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 GPX6P59796 221 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 SPIDRQ14159 915 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 PTPRCAPQ14761 206 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 CRYMQ14894 314 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 PCLAFQ15004 111 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 SPANXN3Q5MJ09 141 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 CASC4Q6P4E1 433 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 CES3Q6UWW8 571 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 ZNF600Q6ZNG1 722 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 FAM83HQ6ZRV2 1179 aaPredicted RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 TRMT10CQ7L0Y3 403 aaKnown RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 HSD11B1LQ7Z5J1 315 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 TECPR1Q7Z6L1 1165 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 PALM2Q8IXS6 379 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 OR4K2Q8NGD2 314 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 OR8J1Q8NGP2 316 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 OR13C4Q8NGS5 318 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 OR13J1Q8NGT2 312 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 AKR7LQ8NHP1 331 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 DUSP19Q8WTR2 217 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 KIAA1143Q96AT1 154 aaPredicted RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 NMD3Q96D46 503 aaKnown RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 MTFMTQ96DP5 389 aaKnown RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 C9orf72Q96LT7 481 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 ZSCAN5AQ9BUG6 496 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 NRSN2Q9GZP1 204 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 WNT10AQ9GZT5 417 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 KCNH6Q9H252 994 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 EPB41L4BQ9H329 900 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 CDC42EP4Q9H3Q1 356 aaKnown RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 SGK2Q9HBY8 427 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 SEMA4BQ9NPR2 832 aaPredicted RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 DNAJB11Q9UBS4 358 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 SLC2A6Q9UGQ3 507 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 MAD1L1Q9Y6D9 718 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 KNL1Q8NG31 2342 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 ATXN2Q99700 1313 aaKnown RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 SPTBN4Q9H254 2564 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 IGHV1OR15-9A0A0B4J2B8 117 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 LIPT2A6NK58 231 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 GOLGA8CPA6NN73 597 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 CLCA1A8K7I4 914 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 L7N2F9 121 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 BTN3A1O00481 513 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 PRPF4O43172 522 aaKnown RBP eCLIP5□□□□□ -1.61
VCAM1-202ENST00000347652 BUD23O43709 281 aaKnown RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 ZNF217O75362 1048 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 GLAP06280 429 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 TUBG1P23258 451 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 HOXA6P31267 233 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 PLA2G5P39877 138 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 CTSKP43235 329 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 SPINT3P49223 89 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 SOX8P57073 446 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 TNFRSF17Q02223 184 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 BOP1Q14137 746 aaKnown RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 ARHGEF7Q14155 803 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 RCN1Q15293 331 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 SKIDA1Q1XH10 827 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 C9orf152Q5JTZ5 239 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 BEND6Q5SZJ8 279 aaPredicted RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 C3orf62Q6ZUJ4 267 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 CYS1Q717R9 158 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 P3H2Q8IVL5 708 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 MREGQ8N565 214 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 CXorf40AQ8TE69 158 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 GAB3Q8WWW8 586 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 CLPTM1LQ96KA5 538 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 DNAJC1Q96KC8 554 aaKnown RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 COQ10AQ96MF6 247 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 PAFAH2Q99487 392 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 WRAP53Q9BUR4 548 aaKnown RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 DUSP15Q9H1R2 295 aaPredicted RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 BPIFA1Q9NP55 256 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 SLC35C2Q9NQQ7 365 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 TUBG2Q9NRH3 451 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 FAM212BQ9NTI7 297 aaPredicted RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 MOCS1Q9NZB8 636 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms