RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 IL5RAQ01344 420 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 XKR6Q5GH73 641 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 HENMT1Q5T8I9 393 aaKnown RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 RNF165Q6ZSG1 346 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 ANKRD33Q7Z3H0 272 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 VN1R5Q7Z5H4 357 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 ENTHD1Q8IYW4 607 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 KLHL23Q8NBE8 558 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 OR5K1Q8NHB7 308 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 HUS1BQ8NHY5 278 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 HDAC2Q92769 488 aaKnown RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 NXPE3Q969Y0 559 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 TESCQ96BS2 214 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 CMTM7Q96FZ5 175 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 ZNF558Q96NG5 402 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 IL17FQ96PD4 163 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 KCNC2Q96PR1 638 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 UGT2B28Q9BY64 529 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 TM7SF3Q9NS93 570 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 PDP1Q9P0J1 537 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 CXXC1Q9P0U4 656 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 RAPGEFL1Q9UHV5 662 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 TBX21Q9UL17 535 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 ZNF510Q9Y2H8 683 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 TRIM17Q9Y577 477 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 CELSR3Q9NYQ7 3312 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 NUMA1Q14980 2115 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 ZNF701M0R085 212 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 BCKDKO14874 412 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 PPM1DO15297 605 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 PFDN1O60925 122 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 LILRB5O75023 590 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 ADAM23O75077 832 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 NME6O75414 186 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 SLCO2B1O94956 709 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 SCELO95171 688 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 NTN1O95631 604 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 ALDH1A1P00352 501 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 JUPP14923 745 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 PRPH2P23942 346 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 LIPAP38571 399 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 RPS13P62277 151 aaKnown RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 NOGQ13253 232 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 CAMK1Q14012 370 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 VEPH1Q14D04 833 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 NPTX1Q15818 432 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 VMACQ2NL98 169 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 MPPE1Q53F39 396 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 BROXQ5VW32 411 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 SHQ1Q6PI26 577 aaKnown RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 CRTC3Q6UUV7 619 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 GDPD4Q6W3E5 623 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 FAM83HQ6ZRV2 1179 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 TECPR1Q7Z6L1 1165 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 HMGN2P46Q86SG4 172 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 CENPSQ8N2Z9 138 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 CPXM2Q8N436 756 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 AMER3Q8N944 861 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 SMYD1Q8NB12 490 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 PIK3C3Q8NEB9 887 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 OR7G3Q8NG95 312 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 OR52E4Q8NGH9 312 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 ZNF420Q8TAQ5 688 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 MCOLN3Q8TDD5 553 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 PROX1Q92786 737 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 YIPF6Q96EC8 236 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 SIGLEC11Q96RL6 698 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 RSPH9Q9H1X1 276 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 SYNPO2LQ9H987 977 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 FAIMQ9NVQ4 179 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 C5AR2Q9P296 337 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 RHCGQ9UBD6 479 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 ATP11BQ9Y2G3 1177 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 PCDHGA6Q9Y5G7 932 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 SCN2AQ99250 2005 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 HEATR5BQ9P2D3 2071 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 PRRT4C9JH25 899 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 M0R082 166 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 WNT9AO14904 365 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 UGT2B11O75310 529 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 ERN1O75460 977 aaKnown RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 E2F6O75461 281 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 PSIP1O75475 530 aaKnown RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 JRKO75564 520 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 FADS2O95864 444 aaKnown RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 TGFB1P01137 390 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 POU2F1P14859 743 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 NPPBP16860 134 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 IGFBP5P24593 272 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 NUDT6P53370 316 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 ESRRGP62508 458 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 DUOXA1Q1HG43 343 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 LRRC26Q2I0M4 334 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 GPR153Q6NV75 609 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 AGTRAPQ6RW13 159 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 DSG4Q86SJ6 1040 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 TSPYL5Q86VY4 417 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 SYT12Q8IV01 421 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 GLB1L3Q8NCI6 653 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms