RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 SEPHS1P49903 392 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 LIMK1P53667 647 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 AQP5P55064 265 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 CYP4F2P78329 520 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 HIST2H2ACQ16777 129 aaPredicted RBP18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 CCDC157Q569K6 752 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 HIST2H2AA3Q6FI13 130 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 CPLX4Q7Z7G2 160 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 DDIASQ8IXT1 998 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 MFSD9Q8NBP5 474 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 SELENOMQ8WWX9 145 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 FAR2Q96K12 515 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 MTERF1Q99551 399 aaKnown RBP18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 MACROD1Q9BQ69 325 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 EBF4Q9BQW3 602 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 SARGQ9BW04 601 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 TRIM55Q9BYV6 548 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 RHBGQ9H310 441 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 ELOVL6Q9H5J4 265 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 WDR55Q9H6Y2 383 aaPredicted RBP18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 PDP2Q9P2J9 529 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 SNX6Q9UNH7 406 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 CCL27Q9Y4X3 112 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 PCDHGA4Q9Y5G9 962 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 PCDHGA11Q9Y5H2 935 aa18.19■□□□□ 0.5
CHMP4A-201ENST00000347519 A0A0J9YVX5 310 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 IGHV5-10-1A0A0J9YXX1 117 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 SH3BGRLO75368 114 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 ULK1O75385 1050 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 ETHE1O95571 254 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 KRT6AP02538 564 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 KRT6BP04259 564 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 CXCR2P25025 360 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 GABRA4P48169 554 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 KRT6CP48668 564 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 INHBCP55103 352 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 HMGCS1Q01581 520 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 IFT88Q13099 833 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 DEFB110Q30KQ9 67 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 XKR7Q5GH72 579 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 FRMPD2BQ6IN97 320 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 EPGNQ6UW88 154 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 Q6ZSR9 355 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 RNF44Q7L0R7 432 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 PRSS42Q7Z5A4 293 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 VN1R4Q7Z5H5 301 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 DNAJC22Q8N4W6 341 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 OR4D9Q8NGE8 314 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 ZNF473Q8WTR7 871 aaKnown RBP18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 C19orf60Q96EN9 201 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 OR2A5Q96R48 311 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 GFM1Q96RP9 751 aaKnown RBP18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 AICDAQ9GZX7 198 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 VTI1BQ9UEU0 232 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 GVINP1Q7Z2Y8 2422 aa18.18■□□□□ 0.5
CHMP4A-201ENST00000347519 LOC105369274A0A096LPK9 316 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 LOC102723532A0A0G2JNH3 316 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 GOLGA8QA0A0J9YX86 632 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 ATP6AP2A0A1C7CYW4 349 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 GOLGA8OA6NCC3 632 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 MAGEB17A8MXT2 336 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 D6RAR5 112 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 GOLGA8NF8WBI6 632 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 SLCO1B7G3V0H7 640 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 HGSO14964 777 aaPredicted RBP18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 ATP6AP2O75787 350 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 TROVE2P10155 538 aaKnown RBP eCLIP18.17■□□□□ 0.51e-9■□□□□ 8.9
CHMP4A-201ENST00000347519 THRAP10827 490 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 IDH3AP50213 366 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 HK2P52789 917 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 CLDN6P56747 220 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 RPS13P62277 151 aaKnown RBP18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 FOXK2Q01167 660 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 COL9A2Q14055 689 aaPredicted RBP18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 KCNAB1Q14722 419 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 DGLUCYQ7Z3D6 616 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 PIGWQ7Z7B1 504 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 B3GNT8Q7Z7M8 397 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 SLITRK4Q8IW52 837 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 OR4N4Q8N0Y3 316 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 AFAP1L2Q8N4X5 818 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 CREB3L4Q8TEY5 395 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 C10orf82Q8WW14 230 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 KLHL6Q8WZ60 621 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 UBE2E3Q969T4 207 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 CCDC74BQ96LY2 380 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 OR52B2Q96RD2 323 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 TMEM120AQ9BXJ8 343 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 ACPTQ9BZG2 426 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 PITHD1Q9GZP4 211 aaPredicted RBP18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 MEAF6Q9HAF1 191 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 DMRT3Q9NQL9 472 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 KLHL14Q9P2G3 628 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 TSC22D4Q9Y3Q8 395 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 DMXL1Q9Y485 3027 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 A0A0G2JND7 137 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 AGRPO00253 132 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 TM4SF5O14894 197 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 P2RX6O15547 441 aa18.17■□□□□ 0.5
CHMP4A-201ENST00000347519 SNX3O60493 162 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms