RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 DUSP12Q9UNI6 340 aa12.85□□□□□ -0.35
CASC4-202ENST00000345795 PCDHGA11Q9Y5H2 935 aa12.85□□□□□ -0.35
CASC4-202ENST00000345795 TPRP12270 2363 aaKnown RBP12.85□□□□□ -0.35
CASC4-202ENST00000345795 FAM227AF5H4B4 570 aa12.85□□□□□ -0.35
CASC4-202ENST00000345795 ERI3O43414 337 aaKnown RBP12.85□□□□□ -0.35
CASC4-202ENST00000345795 FRS3O43559 492 aa12.85□□□□□ -0.35
CASC4-202ENST00000345795 ASGR2P07307 311 aa12.85□□□□□ -0.35
CASC4-202ENST00000345795 FGF4P08620 206 aa12.85□□□□□ -0.35
CASC4-202ENST00000345795 TCEA1P23193 301 aaKnown RBP12.85□□□□□ -0.35
CASC4-202ENST00000345795 PSMD7P51665 324 aa12.85□□□□□ -0.35
CASC4-202ENST00000345795 MLLT10P55197 1068 aa12.85□□□□□ -0.35
CASC4-202ENST00000345795 ERVK-21P61565 698 aa12.85□□□□□ -0.35
CASC4-202ENST00000345795 PRAMEF13Q5VWM6 474 aa12.85□□□□□ -0.35
CASC4-202ENST00000345795 TMIGD1Q6UXZ0 262 aa12.85□□□□□ -0.35
CASC4-202ENST00000345795 RAB42Q8N4Z0 105 aa12.85□□□□□ -0.35
CASC4-202ENST00000345795 ZNF480Q8WV37 535 aa12.85□□□□□ -0.35
CASC4-202ENST00000345795 CXorf40BQ96DE9 158 aa12.85□□□□□ -0.35
CASC4-202ENST00000345795 MAELQ96JY0 434 aaKnown RBP12.85□□□□□ -0.35
CASC4-202ENST00000345795 ZIM2Q9NZV7 527 aa12.85□□□□□ -0.35
CASC4-202ENST00000345795 SCN5AQ14524 2016 aa12.85□□□□□ -0.35
CASC4-202ENST00000345795 MIA3Q5JRA6 1907 aa12.85□□□□□ -0.35
CASC4-202ENST00000345795 SGTAO43765 313 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 ETHE1O95571 254 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 APODP05090 189 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 DBTP11182 482 aaKnown RBP12.84□□□□□ -0.35
CASC4-202ENST00000345795 CAMK1Q14012 370 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 PAGE2BQ5JRK9 111 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 TMEM240Q5SV17 173 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 B3GNT6Q6ZMB0 384 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 HERVK_113Q902F9 699 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 ARRDC3Q96B67 414 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 NLNQ9BYT8 704 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 RSL24D1Q9UHA3 163 aaKnown RBP12.84□□□□□ -0.35
CASC4-202ENST00000345795 PTBP2Q9UKA9 531 aaKnown RBP12.84□□□□□ -0.35
CASC4-202ENST00000345795 RAB26Q9ULW5 256 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 LYVE1Q9Y5Y7 322 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 KPNA4O00629 521 aaPredicted RBP12.84□□□□□ -0.35
CASC4-202ENST00000345795 ZNF182P17025 639 aaPredicted RBP12.84□□□□□ -0.35
CASC4-202ENST00000345795 AOAHP28039 575 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 RRM2P31350 389 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 MAP2K4P45985 399 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 ARSFP54793 590 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 HOXC5Q00444 222 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 CREMQ03060 361 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 TMEM236Q5W0B7 351 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 MTSS1LQ765P7 747 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 SNX29P2Q8IUI4 249 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 NAGSQ8N159 534 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 SAMD11Q96NU1 681 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 VPS35Q96QK1 796 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 TPSD1Q9BZJ3 242 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 EHD1Q9H4M9 534 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 CCM2LQ9NUG4 571 aaPredicted RBP12.84□□□□□ -0.35
CASC4-202ENST00000345795 NDOR1Q9UHB4 597 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 A0A1W2PQU0 124 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 BCKDKO14874 412 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 NDUFS4O43181 175 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 RAP2AP10114 183 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 GJA8P48165 433 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 INHBCP55103 352 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 SLC7A9P82251 487 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 SLC14A1Q13336 389 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 ITGADQ13349 1161 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 PON2Q15165 354 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 SHHQ15465 462 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.84□□□□□ -0.35
CASC4-202ENST00000345795 CLEC12AQ5QGZ9 265 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 PPP4R4Q6NUP7 873 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 C10orf111Q8N326 155 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 TMCO5AQ8N6Q1 288 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 B4GALNT2Q8NHY0 566 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 GTF2H4Q92759 462 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 DGCR14Q96DF8 476 aaKnown RBP12.84□□□□□ -0.35
CASC4-202ENST00000345795 ALG14Q96F25 216 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 TOX2Q96NM4 488 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 ABCG4Q9H172 646 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 SCN3BQ9NY72 215 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 OR51B4Q9Y5P0 310 aa12.84□□□□□ -0.35
CASC4-202ENST00000345795 A0A1W2PRB8 838 aa12.83□□□□□ -0.35
CASC4-202ENST00000345795 ANGPTL1O95841 491 aa12.83□□□□□ -0.35
CASC4-202ENST00000345795 CXCL10P02778 98 aa12.83□□□□□ -0.35
CASC4-202ENST00000345795 ZNF750Q32MQ0 723 aa12.83□□□□□ -0.35
CASC4-202ENST00000345795 POMZP3Q6PJE2 187 aa12.83□□□□□ -0.35
CASC4-202ENST00000345795 ZNF852Q6ZMS4 543 aa12.83□□□□□ -0.35
CASC4-202ENST00000345795 ERN2Q76MJ5 926 aaKnown RBP12.83□□□□□ -0.35
CASC4-202ENST00000345795 R3HCC1LQ7Z5L2 792 aaKnown RBP12.83□□□□□ -0.35
CASC4-202ENST00000345795 TMC8Q8IU68 726 aa12.83□□□□□ -0.35
CASC4-202ENST00000345795 GALNT13Q8IUC8 556 aa12.83□□□□□ -0.35
CASC4-202ENST00000345795 REM2Q8IYK8 340 aaPredicted RBP12.83□□□□□ -0.35
CASC4-202ENST00000345795 CCDC116Q8IYX3 515 aa12.83□□□□□ -0.35
CASC4-202ENST00000345795 STX19Q8N4C7 294 aa12.83□□□□□ -0.35
CASC4-202ENST00000345795 RAD51AP1Q96B01 352 aa12.83□□□□□ -0.35
CASC4-202ENST00000345795 BTBD9Q96Q07 612 aa12.83□□□□□ -0.35
CASC4-202ENST00000345795 CCDC3Q9BQI4 270 aa12.83□□□□□ -0.35
CASC4-202ENST00000345795 P2RY12Q9H244 342 aa12.83□□□□□ -0.35
CASC4-202ENST00000345795 BTBD3Q9Y2F9 522 aa12.83□□□□□ -0.35
CASC4-202ENST00000345795 EFCAB14O75071 495 aa12.83□□□□□ -0.36
CASC4-202ENST00000345795 CH25HO95992 272 aa12.83□□□□□ -0.36
CASC4-202ENST00000345795 GPIP06744 558 aa12.83□□□□□ -0.36
CASC4-202ENST00000345795 ENO2P09104 434 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms