RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 BIRC8Q96P09 236 aa13.05□□□□□ -0.32
UPK3BL1-201ENST00000340457 SIGLEC12Q96PQ1 595 aa13.05□□□□□ -0.32
UPK3BL1-201ENST00000340457 TUBB6Q9BUF5 446 aa13.05□□□□□ -0.32
UPK3BL1-201ENST00000340457 TGIF2Q9GZN2 237 aa13.05□□□□□ -0.32
UPK3BL1-201ENST00000340457 VN1R1Q9GZP7 353 aa13.05□□□□□ -0.32
UPK3BL1-201ENST00000340457 ZNF148Q9UQR1 794 aa13.05□□□□□ -0.32
UPK3BL1-201ENST00000340457 NPIPA5E9PKD4 350 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 KPNA5O15131 536 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 MAN1A2O60476 641 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 MATN4O95460 622 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 F7P08709 466 aaPredicted RBP13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 MYBL2P10244 700 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 ICAM2P13598 275 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 RPS3P23396 243 aaKnown RBP eCLIP13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 STIP1P31948 543 aaKnown RBP13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 SMSP52788 366 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 EMP3P54852 163 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 LONRF1Q17RB8 773 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 ANKRD20A4Q4UJ75 823 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 PCID2Q5JVF3 399 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 ACER2Q5QJU3 275 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 ICE2Q659A1 982 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 ZNF425Q6IV72 752 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 C3P1Q6ZMU1 363 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 PRSS41Q7RTY9 318 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 SLC13A5Q86YT5 568 aaPredicted RBP13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 METTL21AQ8WXB1 218 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 MTFMTQ96DP5 389 aaKnown RBP13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 RUNDC3BQ96NL0 473 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 CYTH2Q99418 400 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 PKP4Q99569 1192 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 MACROD1Q9BQ69 325 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 TREX1Q9NSU2 369 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 TEKT2Q9UIF3 430 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 NPIPA1Q9UND3 350 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 CRYL1Q9Y2S2 319 aa13.04□□□□□ -0.32
UPK3BL1-201ENST00000340457 NAV3Q8IVL0 2385 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 VAPBO95292 243 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 ERGP11308 486 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 CHRM3P20309 590 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 ARNTP27540 789 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 CD96P40200 585 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 PNLIPRP1P54315 467 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 HSF1Q00613 529 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 ALDH6A1Q02252 535 aaKnown RBP13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 PRDX1Q06830 199 aaKnown RBP13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 C2orf54Q08AI8 447 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 TUBA3CQ13748 450 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 NAA25Q14CX7 972 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 KLHL38Q2WGJ6 581 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 TEX35Q5T0J7 233 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 GARNL3Q5VVW2 1013 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 SPINK14Q6IE38 97 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 TUBA3EQ6PEY2 450 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 CPEB2Q7Z5Q1 589 aaKnown RBP13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 LRRC6Q86X45 466 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 SPPL2CQ8IUH8 684 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 SPATA4Q8NEY3 305 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 LPGAT1Q92604 370 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 PEX13Q92968 403 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 MS4A14Q96JA4 679 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 NPAS2Q99743 824 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 KCNK13Q9HB14 408 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 HCN3Q9P1Z3 774 aa13.03□□□□□ -0.32
UPK3BL1-201ENST00000340457 H7BY64 318 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 MYO1CO00159 1063 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 TTI1O43156 1089 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 PHF2O75151 1096 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 CLDN14O95500 239 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 SLC16A8O95907 504 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 SYF2O95926 243 aaKnown RBP13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 PKMP14618 531 aaKnown RBP13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 SSTR2P30874 369 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 RPL22P35268 128 aaKnown RBP13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 AVPR1BP47901 424 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 AP2B1P63010 937 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 GBX1Q14549 363 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 KCNJ11Q14654 390 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 OR1C1Q15619 314 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 C8orf74Q6P047 294 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 CRLF3Q8IUI8 442 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 CEP97Q8IW35 865 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 MPP5Q8N3R9 675 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 CCDC89Q8N998 374 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 MDS2Q8NDY4 140 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 MFSD3Q96ES6 412 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 GPR137Q96N19 417 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 PRAP1Q96NZ9 151 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 SLC30A3Q99726 388 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 HOMER3Q9NSC5 361 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 ZNF835Q9Y2P0 537 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 MEMO1Q9Y316 297 aa13.02□□□□□ -0.33
UPK3BL1-201ENST00000340457 INTS1Q8N201 2190 aaKnown RBP13.01□□□□□ -0.33
UPK3BL1-201ENST00000340457 NIPBLQ6KC79 2804 aaeCLIP13.01□□□□□ -0.33
UPK3BL1-201ENST00000340457 UQCRHLA0A096LP55 91 aa13.01□□□□□ -0.33
UPK3BL1-201ENST00000340457 SGK494L7N484 410 aa13.01□□□□□ -0.33
UPK3BL1-201ENST00000340457 SMAPO00193 183 aa13.01□□□□□ -0.33
UPK3BL1-201ENST00000340457 PSIP1O75475 530 aaKnown RBP13.01□□□□□ -0.33
UPK3BL1-201ENST00000340457 EZRP15311 586 aaKnown RBP13.01□□□□□ -0.33
UPK3BL1-201ENST00000340457 IL1RNP18510 177 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms