RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 TRAPPC2BP0DI82 140 aa19.5■□□□□ 0.71
UBC-201ENST00000339647 SDC1P18827 310 aa19.5■□□□□ 0.71
UBC-201ENST00000339647 PTGER3P43115 390 aa19.5■□□□□ 0.71
UBC-201ENST00000339647 RPS5P46782 204 aaKnown RBP19.5■□□□□ 0.71
UBC-201ENST00000339647 OR3A3P47888 321 aa19.5■□□□□ 0.71
UBC-201ENST00000339647 KCNJ10P78508 379 aa19.5■□□□□ 0.71
UBC-201ENST00000339647 MADCAM1Q13477 382 aa19.5■□□□□ 0.71
UBC-201ENST00000339647 SYCE2Q6PIF2 218 aa19.5■□□□□ 0.71
UBC-201ENST00000339647 ZNF367Q7RTV3 350 aa19.5■□□□□ 0.71
UBC-201ENST00000339647 TSEN54Q7Z6J9 526 aaKnown RBP19.5■□□□□ 0.71
UBC-201ENST00000339647 PGBD3Q8N328 593 aa19.5■□□□□ 0.71
UBC-201ENST00000339647 NIPSNAP1Q9BPW8 284 aa19.5■□□□□ 0.71
UBC-201ENST00000339647 MGME1Q9BQP7 344 aa19.5■□□□□ 0.71
UBC-201ENST00000339647 SYT17Q9BSW7 474 aa19.5■□□□□ 0.71
UBC-201ENST00000339647 WDR47O94967 919 aa19.49■□□□□ 0.71
UBC-201ENST00000339647 F2P00734 622 aa19.49■□□□□ 0.71
UBC-201ENST00000339647 ZXDBP98169 803 aa19.49■□□□□ 0.71
UBC-201ENST00000339647 FOXD4Q12950 439 aaPredicted RBP19.49■□□□□ 0.71
UBC-201ENST00000339647 EFR3AQ14156 821 aa19.49■□□□□ 0.71
UBC-201ENST00000339647 C9orf131Q5VYM1 1079 aa19.49■□□□□ 0.71
UBC-201ENST00000339647 PAMR1Q6UXH9 720 aa19.49■□□□□ 0.71
UBC-201ENST00000339647 GPR152Q8TDT2 470 aa19.49■□□□□ 0.71
UBC-201ENST00000339647 PCDHGB3Q9Y5G1 929 aa19.49■□□□□ 0.71
UBC-201ENST00000339647 PTPRDP23468 1912 aa19.49■□□□□ 0.71
UBC-201ENST00000339647 CCDC182A6NF36 153 aa19.49■□□□□ 0.71
UBC-201ENST00000339647 MEN1O00255 615 aa19.49■□□□□ 0.71
UBC-201ENST00000339647 TNFRSF11BO00300 401 aa19.49■□□□□ 0.71
UBC-201ENST00000339647 SCAMP3O14828 347 aaKnown RBP19.49■□□□□ 0.71
UBC-201ENST00000339647 ZNF780AO75290 641 aaPredicted RBP19.49■□□□□ 0.71
UBC-201ENST00000339647 CPSF4O95639 269 aaKnown RBP19.49■□□□□ 0.71
UBC-201ENST00000339647 HOXC5Q00444 222 aa19.49■□□□□ 0.71
UBC-201ENST00000339647 CD300LGQ6UXG3 332 aa19.49■□□□□ 0.71
UBC-201ENST00000339647 SPON2Q9BUD6 331 aa19.49■□□□□ 0.71
UBC-201ENST00000339647 SNTG1Q9NSN8 517 aa19.49■□□□□ 0.71
UBC-201ENST00000339647 ABI2Q9NYB9 513 aaPredicted RBP19.49■□□□□ 0.71
UBC-201ENST00000339647 OGDHLQ9ULD0 1010 aa19.49■□□□□ 0.71
UBC-201ENST00000339647 DUSP12Q9UNI6 340 aa19.49■□□□□ 0.71
UBC-201ENST00000339647 MOXD2PA6NHM9 499 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 DRGXA6NNA5 263 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 CXCL11O14625 94 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 EBLN1P0CF75 366 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 MYL9P24844 172 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 PPIGQ13427 754 aaKnown RBP eCLIP19.48■□□□□ 0.712e-6■■□□□ 14.1
UBC-201ENST00000339647 MON1AQ86VX9 555 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 RNF130Q86XS8 419 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 FAM126AQ9BYI3 521 aaPredicted RBP19.48■□□□□ 0.71
UBC-201ENST00000339647 C11orf54Q9H0W9 315 aaPredicted RBP19.48■□□□□ 0.71
UBC-201ENST00000339647 TRPS1Q9UHF7 1281 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 OARD1Q9Y530 152 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 B4DXG7 233 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 POU2F1P14859 743 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 HOXD9P28356 352 aaPredicted RBP19.48■□□□□ 0.71
UBC-201ENST00000339647 TIMM50Q3ZCQ8 353 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 LRRC66Q68CR7 880 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 ALG1LQ6GMV1 187 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 PTRHD1Q6GMV3 140 aaKnown RBP19.48■□□□□ 0.71
UBC-201ENST00000339647 OR10G2Q8NGC3 310 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 NELL1Q92832 810 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 MAL2Q969L2 176 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 APIPQ96GX9 242 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 MAP6Q96JE9 813 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 NTMT1Q9BV86 223 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 BOCQ9BWV1 1114 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 STMN3Q9NZ72 180 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 SNX7Q9UNH6 387 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 PRELID1Q9Y255 219 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 NLRC5Q86WI3 1866 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 INSIG1O15503 277 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 AKR7A2O43488 359 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 EPB42P16452 691 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 GPX2P18283 190 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 SOX3P41225 446 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 YBEYP58557 167 aaPredicted RBP19.48■□□□□ 0.71
UBC-201ENST00000339647 CSTF3Q12996 717 aaKnown RBP19.48■□□□□ 0.71
UBC-201ENST00000339647 EIF4HQ15056 248 aaKnown RBP19.48■□□□□ 0.71
UBC-201ENST00000339647 PRAMEF19Q5SWL8 479 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 CLECL1Q8IZS7 167 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 CHCHD4Q8N4Q1 142 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 SPERTQ8NA61 448 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 WDR36Q8NI36 951 aaKnown RBP19.48■□□□□ 0.71
UBC-201ENST00000339647 SELENOMQ8WWX9 145 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 CINPQ9BW66 212 aaPredicted RBP19.48■□□□□ 0.71
UBC-201ENST00000339647 GON7Q9BXV9 100 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 ZNF717Q9BY31 904 aaPredicted RBP19.48■□□□□ 0.71
UBC-201ENST00000339647 SLC22A4Q9H015 551 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 TMEM39AQ9NV64 488 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 IMPAD1Q9NX62 359 aa19.48■□□□□ 0.71
UBC-201ENST00000339647 OTOFQ9HC10 1997 aa19.47■□□□□ 0.71
UBC-201ENST00000339647 EPN2O95208 641 aa19.47■□□□□ 0.71
UBC-201ENST00000339647 CBLP22681 906 aa19.47■□□□□ 0.71
UBC-201ENST00000339647 PSMA3P25788 255 aa19.47■□□□□ 0.71
UBC-201ENST00000339647 RPL9P32969 192 aaKnown RBP19.47■□□□□ 0.71
UBC-201ENST00000339647 KIR3DL1P43629 444 aa19.47■□□□□ 0.71
UBC-201ENST00000339647 ARPP19P56211 112 aa19.47■□□□□ 0.71
UBC-201ENST00000339647 SNRPD2P62316 118 aaKnown RBP19.47■□□□□ 0.71
UBC-201ENST00000339647 DUOXA1Q1HG43 343 aa19.47■□□□□ 0.71
UBC-201ENST00000339647 BPHLQ86WA6 291 aaPredicted RBP19.47■□□□□ 0.71
UBC-201ENST00000339647 CACTIN-AS1Q8N1I8 211 aa19.47■□□□□ 0.71
UBC-201ENST00000339647 CLDN19Q8N6F1 224 aa19.47■□□□□ 0.71
UBC-201ENST00000339647 NATD1Q8N6N6 113 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms