RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 NPPAP01160 153 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 GKP32189 559 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 PREPP48147 710 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 SLC10A2Q12908 348 aaPredicted RBP12.12□□□□□ -0.47
OTOF-203ENST00000339598 LASP1Q14847 261 aaKnown RBP12.12□□□□□ -0.47
OTOF-203ENST00000339598 SUSD1Q6UWL2 747 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 SLC22A15Q8IZD6 547 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 OR2L5Q8NG80 312 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 GRHL3Q8TE85 626 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 TSPEARQ8WU66 669 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 ARNTL2Q8WYA1 636 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 ZNF778Q96MU6 729 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 C11orf84Q9BUA3 381 aaPredicted RBP12.12□□□□□ -0.47
OTOF-203ENST00000339598 BAIAP2Q9UQB8 552 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 A0A1W2PRQ8 180 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 MMP20O60882 483 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 SCGNO76038 276 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 ZNF30P17039 623 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 BLKP51451 505 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 OR12D2P58182 307 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 MOGQ16653 247 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 PDCD4Q53EL6 469 aaKnown RBP12.12□□□□□ -0.47
OTOF-203ENST00000339598 CYBRD1Q53TN4 286 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 ANKRD26P1Q6NSI1 321 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 QSOX2Q6ZRP7 698 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 TMEM135Q86UB9 458 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 SLC25A36Q96CQ1 311 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 PSKH2Q96QS6 385 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 SOX17Q9H6I2 414 aaPredicted RBP12.12□□□□□ -0.47
OTOF-203ENST00000339598 BRD7Q9NPI1 651 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 EIF3KQ9UBQ5 218 aaKnown RBP12.12□□□□□ -0.47
OTOF-203ENST00000339598 AASSQ9UDR5 926 aa12.12□□□□□ -0.47
OTOF-203ENST00000339598 COL1A1P02452 1464 aaPredicted RBP12.12□□□□□ -0.47
OTOF-203ENST00000339598 PSMD9O00233 223 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 PDCD5O14737 125 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 HLA-DPB1P04440 258 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 HAPLN1P10915 354 aaPredicted RBP12.11□□□□□ -0.47
OTOF-203ENST00000339598 ACADLP28330 430 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 CDH11P55287 796 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 TUBA1BP68363 451 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 PITPNAQ00169 270 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 CEACAM7Q14002 265 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 C22orf39Q6P5X5 142 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 TUBA1AQ71U36 451 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 ADGRD2Q7Z7M1 963 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 SLC45A3Q96JT2 553 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 CCDC106Q9BWC9 280 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 TSSK6Q9BXA6 273 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 NEUROD4Q9HD90 331 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 UCKL1Q9NWZ5 548 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 UPB1Q9UBR1 384 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 HCN4Q9Y3Q4 1203 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 OR1I1O60431 355 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 SNAP29O95721 258 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 GSTT2BP0CG30 244 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 SLC35E2BP0CK96 405 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 NDUFS1P28331 727 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 ECHS1P30084 290 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 GMPRP36959 345 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 ST3GAL3Q11203 375 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 GRB7Q14451 532 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 TCEANCQ8N8B7 351 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 MINDY2Q8NBR6 621 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 RAB8BQ92930 207 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 PPP1R14BQ96C90 147 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 ZNF382Q96SR6 550 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 RC3H2Q9HBD1 1191 aaKnown RBP12.11□□□□□ -0.47
OTOF-203ENST00000339598 MRM3Q9HC36 420 aaKnown RBP12.11□□□□□ -0.47
OTOF-203ENST00000339598 TM9SF3Q9HD45 589 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 CENPMQ9NSP4 180 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 CYTH4Q9UIA0 394 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 CLCA3PQ9Y6N3 262 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 MYOCOSA0A1B0GUC4 107 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 OR6C70A6NIJ9 312 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 BEST1O76090 585 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 CDRT1O95170 752 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 RCBTB2O95199 551 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 C6orf47O95873 294 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 RENP00797 406 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 IVDP26440 423 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 TECRLQ5HYJ1 363 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 ULK3Q6PHR2 472 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 SLC22A16Q86VW1 577 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 NRSN1Q8IZ57 195 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 DENND1AQ8TEH3 1009 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 SCAMP4Q969E2 229 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 SIPA1Q96FS4 1042 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 MNTQ99583 582 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 TBL1XR1Q9BZK7 514 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 IFT46Q9NQC8 304 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 NLE1Q9NVX2 485 aaPredicted RBP12.11□□□□□ -0.47
OTOF-203ENST00000339598 RNF6Q9Y252 685 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 KCNK6Q9Y257 313 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 GMEB1Q9Y692 573 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 DFNA5O60443 496 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 LEPRP48357 1165 aaKnown RBP12.11□□□□□ -0.47
OTOF-203ENST00000339598 TUBA3EQ6PEY2 450 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 IMP4Q96G21 291 aaKnown RBP12.11□□□□□ -0.47
OTOF-203ENST00000339598 DNAJC27Q9NZQ0 273 aa12.11□□□□□ -0.47
OTOF-203ENST00000339598 RHCGQ9UBD6 479 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms