RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 C8orf89P0DMQ9 161 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 UMPSP11172 480 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 PTGER1P34995 402 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 OR1E2P47887 323 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 LBX1P52954 281 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 HYAL2Q12891 473 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 TMEM115Q12893 351 aaPredicted RBP6.28□□□□□ -1.4
HMG20A-201ENST00000336216 ZFP69Q49AA0 526 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 ZNF542PQ5EBM4 170 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 ATAD3BQ5T9A4 648 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 LYPLAL1Q5VWZ2 237 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 FRG2Q64ET8 278 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 AGTRAPQ6RW13 159 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 KDELC1Q6UW63 502 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 LARP4Q71RC2 724 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMG20A-201ENST00000336216 SPATC1Q76KD6 591 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 AMZ2Q86W34 360 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 ZDHHC21Q8IVQ6 265 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 SVOPQ8N4V2 548 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 DTWD1Q8N5C7 304 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 LEMD2Q8NC56 503 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 C7orf57Q8NEG2 295 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 ARRDC2Q8TBH0 407 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 KCNJ9Q92806 393 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 REPS1Q96D71 796 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 MTERF3Q96E29 417 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 FRG2BQ96QU4 278 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 SLC46A2Q9BY10 475 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 TP63Q9H3D4 680 aaPredicted RBP6.28□□□□□ -1.4
HMG20A-201ENST00000336216 RPRD1BQ9NQG5 326 aaKnown RBP6.28□□□□□ -1.4
HMG20A-201ENST00000336216 CCDC177Q9NQR7 707 aaPredicted RBP6.28□□□□□ -1.4
HMG20A-201ENST00000336216 FAM118AQ9NWS6 357 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 SOHLH2Q9NX45 425 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 CLDND1Q9NY35 253 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 RHCGQ9UBD6 479 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 VPS29Q9UBQ0 182 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 TAC3Q9UHF0 121 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 FBXL21Q9UKT6 434 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 CCL26Q9Y258 94 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 NINQ8N4C6 2090 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 SVILO95425 2214 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 WDR90Q96KV7 1748 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 HIDE1A8MVS5 230 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 MAGEB17A8MXT2 336 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 HHLA1C9JL84 531 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 CLIC1O00299 241 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 MT-ND2P03891 347 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 RPN2P04844 631 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 LCKP06239 509 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 ADH5P11766 374 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 CDH1P12830 882 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 CTSKP43235 329 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 PRAMEF14Q5SWL7 426 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 FAM46CQ5VWP2 391 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 PPP2R2DQ66LE6 453 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 DENND5AQ6IQ26 1287 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 MED27Q6P2C8 311 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 METTL3Q86U44 580 aaKnown RBP6.28□□□□□ -1.4
HMG20A-201ENST00000336216 WBP2Q969T9 261 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 FUBP1Q96AE4 644 aaKnown RBP6.28□□□□□ -1.4
HMG20A-201ENST00000336216 PGAP3Q96FM1 320 aaPredicted RBP6.28□□□□□ -1.4
HMG20A-201ENST00000336216 ALPK1Q96QP1 1244 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 DPH2Q9BQC3 489 aaPredicted RBP6.28□□□□□ -1.4
HMG20A-201ENST00000336216 DERL2Q9GZP9 239 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 SLC32A1Q9H598 525 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 KAT8Q9H7Z6 458 aaKnown RBP6.28□□□□□ -1.4
HMG20A-201ENST00000336216 NEK6Q9HC98 313 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 ZNF221Q9UK13 617 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 PCDHGA3Q9Y5H0 932 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 OTOFQ9HC10 1997 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 H7BY64 318 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 TNFRSF10BO14763 440 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 PRAMEF12O95522 483 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 ENGP17813 658 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 SOX6P35712 828 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 HMGCLP35914 325 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 ACTR1BP42025 376 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 RAB15P59190 212 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 ERVPABLB-1P60509 514 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 ACTR1AP61163 376 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 PPIGQ13427 754 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMG20A-201ENST00000336216 SELPLGQ14242 412 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 SEMA3AQ14563 771 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 GRIN2CQ14957 1233 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 AAK1Q2M2I8 961 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 RFX4Q33E94 735 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 GPR33Q49SQ1 333 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMG20A-201ENST00000336216 OTUD1Q5VV17 481 aaPredicted RBP6.28□□□□□ -1.4
HMG20A-201ENST00000336216 LCN8Q6JVE9 175 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 BLOC1S3Q6QNY0 202 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 C16orf62Q7Z3J2 963 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 MFSD2AQ8NA29 543 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 HMGB4Q8WW32 186 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 HERVK_113Q902F9 699 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 TFGQ92734 400 aaPredicted RBP6.28□□□□□ -1.4
HMG20A-201ENST00000336216 RAB8BQ92930 207 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 TMEM125Q96AQ2 219 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 PRAP1Q96NZ9 151 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 KXD1Q9BQD3 176 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms