RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 MAD2L1Q13257 205 aaPredicted RBP12.12□□□□□ -0.47
LIMK1-201ENST00000336180 PRSS53Q2L4Q9 553 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 CAPN13Q6MZZ7 669 aaPredicted RBP12.12□□□□□ -0.47
LIMK1-201ENST00000336180 CES5AQ6NT32 575 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 SLC44A2Q8IWA5 706 aaPredicted RBP12.12□□□□□ -0.47
LIMK1-201ENST00000336180 ST13P4Q8IZP2 240 aaPredicted RBP12.12□□□□□ -0.47
LIMK1-201ENST00000336180 DPP10Q8N608 796 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 ZNF548Q8NEK5 533 aaPredicted RBP12.12□□□□□ -0.47
LIMK1-201ENST00000336180 ZUFSPQ96AP4 578 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 CCT7Q99832 543 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 GDE1Q9NZC3 331 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 DYRK1BQ9Y463 629 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 WDFY4Q6ZS81 3184 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 ZNF106Q9H2Y7 1883 aaKnown RBP12.12□□□□□ -0.47
LIMK1-201ENST00000336180 AQP12BA6NM10 295 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 K7EQS6 105 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 NARSO43776 548 aaKnown RBP12.12□□□□□ -0.47
LIMK1-201ENST00000336180 PCDH7O60245 1069 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 PRKRAO75569 313 aaKnown RBP12.12□□□□□ -0.47
LIMK1-201ENST00000336180 LDLRP01130 860 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 IL6P05231 212 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 POLR2IP36954 125 aaKnown RBP12.12□□□□□ -0.47
LIMK1-201ENST00000336180 VAC14Q08AM6 782 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 SP140Q13342 867 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 ITPRIPL2Q3MIP1 535 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 RUNDC3AQ59EK9 446 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 CMPK2Q5EBM0 449 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 GALNT5Q7Z7M9 940 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 NLRP8Q86W28 1048 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 SFTPA2Q8IWL1 248 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 AQP12AQ8IXF9 295 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 TCAIMQ8N3R3 496 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 METTL25Q8N6Q8 603 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 TMBIM1Q969X1 311 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 TPD52L3Q96J77 140 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 C12orf66Q96MD2 445 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 FERD3LQ96RJ6 166 aa12.12□□□□□ -0.47
LIMK1-201ENST00000336180 PIPSLA2A3N6 862 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 ALPPL2P10696 532 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 RPS26P62854 115 aaKnown RBP12.11□□□□□ -0.47
LIMK1-201ENST00000336180 ZNF542PQ5EBM4 170 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 TMEM196Q5HYL7 178 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.11□□□□□ -0.47
LIMK1-201ENST00000336180 SPESP1Q6UW49 350 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 KIAA1324Q6UXG2 1013 aaKnown RBP12.11□□□□□ -0.47
LIMK1-201ENST00000336180 SZRD1Q7Z422 152 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 TMEM179BQ7Z7N9 219 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 CCL4L1Q8NHW4 92 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 NACC2Q96BF6 587 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 F2RL3Q96RI0 385 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 SNX11Q9Y5W9 270 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 MYO10Q9HD67 2058 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 MYO1GB0I1T2 1018 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 ARNTLO00327 626 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 ACOX3O15254 700 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 TNRC18O15417 2968 aaPredicted RBP12.11□□□□□ -0.47
LIMK1-201ENST00000336180 FAM58BPP0C7Q3 252 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 CYP4B1P13584 511 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 GGT1P19440 569 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 AK4P27144 223 aaPredicted RBP12.11□□□□□ -0.47
LIMK1-201ENST00000336180 HTR1EP28566 365 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 CCT8P50990 548 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 PNLIPRP1P54315 467 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 GRIK2Q13002 908 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 GAB1Q13480 694 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 MED27Q6P2C8 311 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 OLIG3Q7RTU3 272 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 SGCDQ92629 289 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 PRDM8Q9NQV8 689 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 CFAP54Q96N23 3096 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 POM121BA6NF01 834 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 GLOD5A6NK44 160 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 H0Y858 1186 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 CLIC1O00299 241 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 HNRNPRO43390 633 aaKnown RBP12.11□□□□□ -0.47
LIMK1-201ENST00000336180 KLF8O95600 359 aaPredicted RBP12.11□□□□□ -0.47
LIMK1-201ENST00000336180 CST1P01037 141 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 SOAT1P35610 550 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 WNT3P56703 355 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 TAS2R50P59544 299 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 NAA20P61599 178 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 CHRNB3Q05901 458 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 FOXM1Q08050 763 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 FCHO2Q0JRZ9 810 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 KRT33BQ14525 404 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 EIF4HQ15056 248 aaKnown RBP12.11□□□□□ -0.47
LIMK1-201ENST00000336180 COMMD6Q7Z4G1 85 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 DSG4Q86SJ6 1040 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 ZBTB46Q86UZ6 589 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 NRSN1Q8IZ57 195 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 AMER3Q8N944 861 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 OR56A3Q8NH54 315 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 SLC47A1Q96FL8 570 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 BTBD9Q96Q07 612 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 ZCCHC2Q9C0B9 1178 aaKnown RBP12.11□□□□□ -0.47
LIMK1-201ENST00000336180 WDR26Q9H7D7 661 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 KAT8Q9H7Z6 458 aaKnown RBP12.11□□□□□ -0.47
LIMK1-201ENST00000336180 LIN28AQ9H9Z2 209 aaKnown RBP12.11□□□□□ -0.47
LIMK1-201ENST00000336180 NTN4Q9HB63 628 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 CCDC177Q9NQR7 707 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms