RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SDHDO14521 159 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 ULK1O75385 1050 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 CHEK2O96017 543 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 LINC00032P0C843 101 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 CXCR2P25025 360 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 SCTRP47872 440 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 ACADVLP49748 655 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 XKR7Q5GH72 579 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 FBXO42Q6P3S6 717 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 ZNF574Q6ZN55 896 aaPredicted RBP20.61■□□□□ 0.89
TPM1-204ENST00000334895 PIP4P1Q86T03 277 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 DDIASQ8IXT1 998 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 OR2T11Q8NH01 316 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 HUS1BQ8NHY5 278 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 C10orf82Q8WW14 230 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 SELENOMQ8WWX9 145 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 FCRL4Q96PJ5 515 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 PITHD1Q9GZP4 211 aaPredicted RBP20.61■□□□□ 0.89
TPM1-204ENST00000334895 CDV3Q9UKY7 258 aaKnown RBP20.61■□□□□ 0.89
TPM1-204ENST00000334895 TSC22D4Q9Y3Q8 395 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 CCL27Q9Y4X3 112 aa20.61■□□□□ 0.89
TPM1-204ENST00000334895 OR1F1O43749 312 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 CPNE6O95741 557 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 PCNAP12004 261 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 IDH3AP50213 366 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 IFT88Q13099 833 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 RBBP5Q15291 538 aaKnown RBP20.6■□□□□ 0.89
TPM1-204ENST00000334895 HIST2H2ACQ16777 129 aaPredicted RBP20.6■□□□□ 0.89
TPM1-204ENST00000334895 RSPO4Q2I0M5 234 aaPredicted RBP20.6■□□□□ 0.89
TPM1-204ENST00000334895 HIST2H2AA3Q6FI13 130 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 C19orf47Q8N9M1 422 aaKnown RBP20.6■□□□□ 0.89
TPM1-204ENST00000334895 ZNF473Q8WTR7 871 aaKnown RBP20.6■□□□□ 0.89
TPM1-204ENST00000334895 UBE2E3Q969T4 207 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 MTERF1Q99551 399 aaKnown RBP20.6■□□□□ 0.89
TPM1-204ENST00000334895 SIKE1Q9BRV8 207 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 TMEM120AQ9BXJ8 343 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 RHBGQ9H310 441 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 WDR55Q9H6Y2 383 aaPredicted RBP20.6■□□□□ 0.89
TPM1-204ENST00000334895 FAM60AQ9NP50 221 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 SEMA5BQ9P283 1151 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 COL27A1Q8IZC6 1860 aaPredicted RBP20.6■□□□□ 0.89
TPM1-204ENST00000334895 HCRTR1O43613 425 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 TBX6O95947 436 aaPredicted RBP20.6■□□□□ 0.89
TPM1-204ENST00000334895 GP1BAP07359 652 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 EPHA3P29320 983 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 CYP4F3Q08477 520 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 DDX39BQ13838 428 aaKnown RBP20.6■□□□□ 0.89
TPM1-204ENST00000334895 TMEM71Q6P5X7 295 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 Q6ZSR9 355 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 TRIM46Q7Z4K8 759 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 REPS1Q96D71 796 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 MAELQ96JY0 434 aaKnown RBP20.6■□□□□ 0.89
TPM1-204ENST00000334895 ACPTQ9BZG2 426 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 ZMYND15Q9H091 742 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 PCDHGA4Q9Y5G9 962 aa20.6■□□□□ 0.89
TPM1-204ENST00000334895 CNOT1A5YKK6 2376 aaKnown RBP20.59■□□□□ 0.89
TPM1-204ENST00000334895 GOLGA8QA0A0J9YX86 632 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 ATP6AP2A0A1C7CYW4 349 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 SERTM1A2A2V5 107 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 GOLGA8OA6NCC3 632 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 TRPC5OSA6NMA1 111 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 MAGEB17A8MXT2 336 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 GOLGA8NF8WBI6 632 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 NTN3O00634 580 aaPredicted RBP20.59■□□□□ 0.89
TPM1-204ENST00000334895 DIAPH2O60879 1101 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 ATP6AP2O75787 350 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 EZRP15311 586 aaKnown RBP20.59■□□□□ 0.89
TPM1-204ENST00000334895 RELAQ04206 551 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 NAA25Q14CX7 972 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 CACHD1Q5VU97 1274 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 RNF44Q7L0R7 432 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 MFSD9Q8NBP5 474 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 BCAS4Q8TDM0 211 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 OR2A5Q96R48 311 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 OR52B2Q96RD2 323 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 DMRT3Q9NQL9 472 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 PDP2Q9P2J9 529 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 GIMAP2Q9UG22 337 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 SPTBN4Q9H254 2564 aa20.59■□□□□ 0.89
TPM1-204ENST00000334895 SLC30A4O14863 429 aa20.58■□□□□ 0.89
TPM1-204ENST00000334895 RASSF9O75901 435 aa20.58■□□□□ 0.89
TPM1-204ENST00000334895 ETHE1O95571 254 aa20.58■□□□□ 0.89
TPM1-204ENST00000334895 GRK3P35626 688 aa20.58■□□□□ 0.89
TPM1-204ENST00000334895 CYP4F2P78329 520 aa20.58■□□□□ 0.89
TPM1-204ENST00000334895 HMGCS1Q01581 520 aa20.58■□□□□ 0.89
TPM1-204ENST00000334895 TUBB3Q13509 450 aa20.58■□□□□ 0.89
TPM1-204ENST00000334895 PRSS42Q7Z5A4 293 aa20.58■□□□□ 0.89
TPM1-204ENST00000334895 VN1R4Q7Z5H5 301 aa20.58■□□□□ 0.89
TPM1-204ENST00000334895 CARFQ8N187 725 aa20.58■□□□□ 0.89
TPM1-204ENST00000334895 SYNDIG1Q9H7V2 258 aa20.58■□□□□ 0.89
TPM1-204ENST00000334895 ADAMTS20P59510 1910 aa20.58■□□□□ 0.88
TPM1-204ENST00000334895 A0A0J9YVX5 310 aa20.57■□□□□ 0.88
TPM1-204ENST00000334895 PIK3CBP42338 1070 aa20.57■□□□□ 0.88
TPM1-204ENST00000334895 ARFIP2P53365 341 aa20.57■□□□□ 0.88
TPM1-204ENST00000334895 RPS15AP62244 130 aaKnown RBP20.57■□□□□ 0.88
TPM1-204ENST00000334895 RPS13P62277 151 aaKnown RBP20.57■□□□□ 0.88
TPM1-204ENST00000334895 ZNF33BQ06732 778 aa20.57■□□□□ 0.88
TPM1-204ENST00000334895 SNAP47Q5SQN1 464 aa20.57■□□□□ 0.88
TPM1-204ENST00000334895 C10orf62Q5T681 223 aaPredicted RBP20.57■□□□□ 0.88
TPM1-204ENST00000334895 FRMPD2BQ6IN97 320 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms