RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 OR2AG2A6NM03 316 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 EFCAB9A8MZ26 197 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 E7EQ34 232 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 DNAJB5O75953 348 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 GBAP04062 536 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 GPX2P18283 190 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 SEPHS1P49903 392 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 DGKEP52429 567 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 CRISP3P54108 245 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 DEFB103AP81534 67 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 MTAPQ13126 283 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 GAB1Q13480 694 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 COLEC12Q5KU26 742 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.9□□□□□ -0.5
VPS33B-201ENST00000333371 ANGPTL8Q6UXH0 198 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 ZNF852Q6ZMS4 543 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 ZNF783Q6ZMS7 281 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 LRRC70Q7Z2Q7 622 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 TSEN54Q7Z6J9 526 aaKnown RBP11.9□□□□□ -0.5
VPS33B-201ENST00000333371 PSD4Q8NDX1 1056 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 ABHD8Q96I13 439 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 DSN1Q9H410 356 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 ZDHHC6Q9H6R6 413 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 FBXO8Q9NRD0 319 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 MRPL17Q9NRX2 175 aaKnown RBP11.9□□□□□ -0.5
VPS33B-201ENST00000333371 ATAD3AQ9NVI7 634 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 RAPGEFL1Q9UHV5 662 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 TBX21Q9UL17 535 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 FZD4Q9ULV1 537 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 RNF6Q9Y252 685 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 PCDHGA6Q9Y5G7 932 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 PCDHGA4Q9Y5G9 962 aa11.9□□□□□ -0.5
VPS33B-201ENST00000333371 ABHD14A-ACY1A0A1B0GW23 586 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 TTC36A6NLP5 189 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 AGAP14A8MT82 685 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 TMEM229AB2RXF0 380 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 KDM1AO60341 852 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 SERPINA4P29622 427 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 CD40LGP29965 261 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 CYP4F2P78329 520 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 IRF8Q02556 426 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 HKDC1Q2TB90 917 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 XKR6Q5GH73 641 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 PLEKHG7Q6ZR37 379 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 EIF3MQ7L2H7 374 aaKnown RBP11.9□□□□□ -0.51
VPS33B-201ENST00000333371 FAM124AQ86V42 546 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 TSPYL5Q86VY4 417 aaPredicted RBP11.9□□□□□ -0.51
VPS33B-201ENST00000333371 CCDC103Q8IW40 242 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 HS6ST3Q8IZP7 471 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 L3MBTL4Q8NA19 623 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 S100ZQ8WXG8 99 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 C7orf34Q96L11 122 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 TMEM121BQ9BXQ6 578 aaPredicted RBP11.9□□□□□ -0.51
VPS33B-201ENST00000333371 DCSTAMPQ9H295 470 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 RUBCNLQ9H714 662 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 RAD18Q9NS91 495 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 DNAJC11Q9NVH1 559 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 TAS2R16Q9NYV7 291 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 SCHIP1Q9P0W5 487 aaPredicted RBP11.9□□□□□ -0.51
VPS33B-201ENST00000333371 STOML2Q9UJZ1 356 aa11.9□□□□□ -0.51
VPS33B-201ENST00000333371 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.89□□□□□ -0.51
VPS33B-201ENST00000333371 M0R082 166 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 PCDH7O60245 1069 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 IGSF6O95976 241 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 C1SP09871 688 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 DBTP11182 482 aaKnown RBP11.89□□□□□ -0.51
VPS33B-201ENST00000333371 PRPS1L1P21108 318 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 GADD45AP24522 165 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 TMED10P49755 219 aaKnown RBP11.89□□□□□ -0.51
VPS33B-201ENST00000333371 KCNJ10P78508 379 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 ABRQ12979 859 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 UTS2BQ765I0 119 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 NAGSQ8N159 534 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 OR2AP1Q8NGE2 309 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 DNAJB8Q8NHS0 232 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 MCFD2Q8NI22 146 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 MED8Q96G25 268 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 SAMD11Q96NU1 681 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 COPS4Q9BT78 406 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 ITM2CQ9NQX7 267 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 DNAH14Q0VDD8 3507 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 GABRR3A8MPY1 467 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 GFRA2O00451 464 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 GCM2O75603 506 aaPredicted RBP11.89□□□□□ -0.51
VPS33B-201ENST00000333371 CLTBP09497 229 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 SRCP12931 536 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 IDH2P48735 452 aaKnown RBP11.89□□□□□ -0.51
VPS33B-201ENST00000333371 CLK1P49759 484 aaKnown RBP11.89□□□□□ -0.51
VPS33B-201ENST00000333371 ITGA1P56199 1179 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 PLEKHG6Q3KR16 790 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 GGTA1PQ4G0N0 100 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 COX20Q5RI15 118 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 LYPLAL1Q5VWZ2 237 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 FAHD1Q6P587 224 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 TPRG1Q6ZUI0 275 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 PRSS48Q7RTY5 328 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 DDX53Q86TM3 631 aaKnown RBP11.89□□□□□ -0.51
VPS33B-201ENST00000333371 CMTM8Q8IZV2 173 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 FAM83FQ8NEG4 500 aaPredicted RBP11.89□□□□□ -0.51
VPS33B-201ENST00000333371 SPPL2AQ8TCT8 520 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms