RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 RIBC2Q9H4K1 309 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 SYNDIG1Q9H7V2 258 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 LIN28AQ9H9Z2 209 aaKnown RBP8.7□□□□□ -1.02
COPB2-201ENST00000333188 RASSF1Q9NS23 344 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 KIF17Q9P2E2 1029 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 SUFUQ9UMX1 484 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 FAF1Q9UNN5 650 aaPredicted RBP8.7□□□□□ -1.02
COPB2-201ENST00000333188 NCKAP1Q9Y2A7 1128 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 TCF20Q9UGU0 1960 aaKnown RBP8.7□□□□□ -1.02
COPB2-201ENST00000333188 SNUPNO95149 360 aaKnown RBP8.7□□□□□ -1.02
COPB2-201ENST00000333188 GSTM1P09488 218 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 PIM1P11309 404 aaPredicted RBP8.7□□□□□ -1.02
COPB2-201ENST00000333188 JUPP14923 745 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 NPPBP16860 134 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 JAK1P23458 1154 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 SLC7A1P30825 629 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 NTSR1P30989 418 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 OLR1P78380 273 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 GSTM4Q03013 218 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 GRSF1Q12849 480 aaKnown RBP eCLIP8.7□□□□□ -1.023e-9■□□□□ 10.3
COPB2-201ENST00000333188 CYP2A13Q16696 494 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 PYCR3Q53H96 274 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 SNAP47Q5SQN1 464 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 ZNF776Q68DI1 518 aaPredicted RBP8.7□□□□□ -1.02
COPB2-201ENST00000333188 COMMD6Q7Z4G1 85 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 OR4N5Q8IXE1 308 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 ATG16L2Q8NAA4 619 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 LCN9Q8WX39 176 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 PPCDCQ96CD2 204 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 CXorf40BQ96DE9 158 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 PDXPQ96GD0 296 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 RIPOR3Q96MK2 946 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 TSC22D3Q99576 134 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 YIPF2Q9BWQ6 316 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 RBCK1Q9BYM8 510 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 SLC25A37Q9NYZ2 338 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 DOLKQ9UPQ8 538 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 ARHGEF17Q96PE2 2063 aaPredicted RBP8.69□□□□□ -1.02
COPB2-201ENST00000333188 PIPSLA2A3N6 862 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 GABRR3A8MPY1 467 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 AREL1O15033 823 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 KLK8O60259 260 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 SDC3O75056 442 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 IL3P08700 152 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 FAM58BPP0C7Q3 252 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 COL9A1P20849 921 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 MAPK1P28482 360 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 CTHP32929 405 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 MAPK12P53778 367 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 MANFP55145 182 aaKnown RBP8.69□□□□□ -1.02
COPB2-201ENST00000333188 GANABQ14697 944 aaKnown RBP8.69□□□□□ -1.02
COPB2-201ENST00000333188 EIF4HQ15056 248 aaKnown RBP8.69□□□□□ -1.02
COPB2-201ENST00000333188 ZNF750Q32MQ0 723 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 PRMT9Q6P2P2 845 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 ZNF852Q6ZMS4 543 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 CCDC81Q6ZN84 652 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 HORMAD1Q86X24 394 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 ZDHHC13Q8IUH4 622 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 KCT2Q8NC54 265 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 VANGL1Q8TAA9 524 aaPredicted RBP8.69□□□□□ -1.02
COPB2-201ENST00000333188 XAGE5Q8WWM1 108 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 UCN3Q969E3 161 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 SLC47A1Q96FL8 570 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 HHIPQ96QV1 700 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 DCUN1D5Q9BTE7 237 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 TMEM168Q9H0V1 697 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 FGF22Q9HCT0 170 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 STARD5Q9NSY2 213 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 GEMIN8Q9NWZ8 242 aaKnown RBP8.69□□□□□ -1.02
COPB2-201ENST00000333188 WARS2Q9UGM6 360 aaKnown RBP8.69□□□□□ -1.02
COPB2-201ENST00000333188 RIMS3Q9UJD0 308 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 HCN2Q9UL51 889 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 SNX11Q9Y5W9 270 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 SPINT1O43278 529 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 EEDO75530 441 aaKnown RBP8.69□□□□□ -1.02
COPB2-201ENST00000333188 SLCO2B1O94956 709 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 FUCA1P04066 466 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 IL6P05231 212 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 ETFAP13804 333 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 PVRP15151 417 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 AMD1P17707 334 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 POLR2CP19387 275 aaPredicted RBP8.69□□□□□ -1.02
COPB2-201ENST00000333188 IDSP22304 550 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 FEN1P39748 380 aaKnown RBP8.69□□□□□ -1.02
COPB2-201ENST00000333188 CHN2P52757 468 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 TAS2R38P59533 333 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 FGL2Q14314 439 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 LRRC32Q14392 662 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 PDCD4Q53EL6 469 aaKnown RBP8.69□□□□□ -1.02
COPB2-201ENST00000333188 USP39Q53GS9 565 aaKnown RBP8.69□□□□□ -1.02
COPB2-201ENST00000333188 PIP5KL1Q5T9C9 394 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 HMBOX1Q6NT76 420 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 PARGQ86W56 976 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 ADCY4Q8NFM4 1077 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 TMBIM1Q969X1 311 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 VOPP1Q96AW1 172 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 CLIP3Q96DZ5 547 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 LRIG1Q96JA1 1093 aa8.69□□□□□ -1.02
COPB2-201ENST00000333188 INSM2Q96T92 566 aaPredicted RBP8.69□□□□□ -1.02
COPB2-201ENST00000333188 NTMT1Q9BV86 223 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms