RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 DCUN1D3Q8IWE4 304 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 OAS3Q9Y6K5 1087 aaKnown RBP12.6□□□□□ -0.39
VSTM4-202ENST00000332853 SRCP12931 536 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 ETV4P43268 484 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 CEACAM7Q14002 265 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 NPTX1Q15818 432 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 MEP1AQ16819 746 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 WDR12Q9GZL7 423 aaKnown RBP12.6□□□□□ -0.39
VSTM4-202ENST00000332853 RIIAD1A6NNX1 92 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 EPCAMP16422 314 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 PSMA1P25786 263 aaKnown RBP12.6□□□□□ -0.39
VSTM4-202ENST00000332853 HMGCLP35914 325 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 TMPRSS11AQ6ZMR5 421 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 ENDOVQ8N8Q3 282 aaKnown RBP12.6□□□□□ -0.39
VSTM4-202ENST00000332853 IPCEF1Q8WWN9 437 aaPredicted RBP12.6□□□□□ -0.39
VSTM4-202ENST00000332853 AP3S1Q92572 193 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 C5orf34Q96MH7 638 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 S100A13Q99584 98 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 CSNK1G1Q9HCP0 422 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 ABCA3Q99758 1704 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 PLOD3O60568 738 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 IGFBP6P24592 240 aaPredicted RBP12.6□□□□□ -0.39
VSTM4-202ENST00000332853 XKP51811 444 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 FOXA1P55317 472 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 KANK2Q63ZY3 851 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 KRT74Q7RTS7 529 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 CAPSLQ8WWF8 208 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 ANKHQ9HCJ1 492 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 CMTM6Q9NX76 183 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 PGAP2Q9UHJ9 254 aa12.6□□□□□ -0.39
VSTM4-202ENST00000332853 KRT33AO76009 404 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 ATF6P18850 670 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 IL12BP29460 328 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 IL18Q14116 193 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 ITPRIPL2Q3MIP1 535 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 ZNF433Q8N7K0 673 aaPredicted RBP12.59□□□□□ -0.39
VSTM4-202ENST00000332853 METTL21AQ8WXB1 218 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 MYLIPQ8WY64 445 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 IFT27Q9BW83 186 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 ELL3Q9HB65 397 aaPredicted RBP12.59□□□□□ -0.39
VSTM4-202ENST00000332853 PCDHB11Q9Y5F2 797 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 LATO43561 262 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 AZGP1P25311 298 aaKnown RBP12.59□□□□□ -0.39
VSTM4-202ENST00000332853 IL12RB1P42701 662 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 BLKP51451 505 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 PRRT3Q5FWE3 981 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 CRB2Q5IJ48 1285 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 STON2Q8WXE9 905 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 SLC22A18Q96BI1 424 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 COL4A1P02462 1669 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 NPIPB15A6NHN6 443 aaPredicted RBP12.59□□□□□ -0.39
VSTM4-202ENST00000332853 SOX14O95416 240 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 TIMP1P01033 207 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 POLR2CP19387 275 aaPredicted RBP12.59□□□□□ -0.39
VSTM4-202ENST00000332853 SPINT3P49223 89 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 TBPL1P62380 186 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 SYT16Q17RD7 645 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 OR10H4Q8NGA5 316 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 CDADC1Q9BWV3 514 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 TOR3AQ9H497 397 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 FAM120CQ9NX05 1096 aaKnown RBP12.59□□□□□ -0.39
VSTM4-202ENST00000332853 PRSS51A0A1B0GVH4 220 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 IRGMA1A4Y4 181 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 CTSAP10619 480 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 MLLT3P42568 568 aaPredicted RBP12.59□□□□□ -0.39
VSTM4-202ENST00000332853 ERVPABLB-1P60509 514 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 IRF5Q13568 498 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 PTPRRQ15256 657 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 FAM92BQ6ZTR7 304 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.59□□□□□ -0.39
VSTM4-202ENST00000332853 FIBINQ8TAL6 211 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 GEMIN6Q8WXD5 167 aaKnown RBP12.59□□□□□ -0.39
VSTM4-202ENST00000332853 DHRS4Q9BTZ2 278 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 RC3H2Q9HBD1 1191 aaKnown RBP12.59□□□□□ -0.39
VSTM4-202ENST00000332853 EVA1BQ9NVM1 165 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 EMCNQ9ULC0 261 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 RIMKLBQ9ULI2 386 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 MYO18AQ92614 2054 aaKnown RBP12.59□□□□□ -0.39
VSTM4-202ENST00000332853 WBP4O75554 376 aaKnown RBP12.59□□□□□ -0.39
VSTM4-202ENST00000332853 ADH1BP00325 375 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 BCKDHAP12694 445 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 MATN1P21941 496 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 IGFALSP35858 605 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 HTR6P50406 440 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 SUZ12Q15022 739 aaKnown RBP12.59□□□□□ -0.39
VSTM4-202ENST00000332853 ZNF311Q5JNZ3 666 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 AIG1Q9NVV5 245 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 MCUBQ9NWR8 336 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 PHF24Q9UPV7 400 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 USP3Q9Y6I4 520 aa12.59□□□□□ -0.39
VSTM4-202ENST00000332853 MPZL2O60487 215 aa12.58□□□□□ -0.39
VSTM4-202ENST00000332853 DHRS4L1P0CG22 281 aa12.58□□□□□ -0.39
VSTM4-202ENST00000332853 ZNF763Q0D2J5 394 aa12.58□□□□□ -0.39
VSTM4-202ENST00000332853 QPRTQ15274 297 aa12.58□□□□□ -0.39
VSTM4-202ENST00000332853 KIAA1161Q6NSJ0 714 aa12.58□□□□□ -0.39
VSTM4-202ENST00000332853 FAM180BQ6P0A1 224 aa12.58□□□□□ -0.39
VSTM4-202ENST00000332853 AQP11Q8NBQ7 271 aa12.58□□□□□ -0.39
VSTM4-202ENST00000332853 SORT1Q99523 831 aa12.58□□□□□ -0.39
VSTM4-202ENST00000332853 TIMMDC1Q9NPL8 285 aa12.58□□□□□ -0.39
VSTM4-202ENST00000332853 THUMPD1Q9NXG2 353 aaKnown RBP12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms