RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 C4orf33Q8N1A6 199 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 METTL27Q8N6F8 245 aaPredicted RBP15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 TEX9Q8N6V9 391 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 C10orf90Q96M02 699 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 GBP5Q96PP8 586 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 MACROD1Q9BQ69 325 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 IL17BQ9UHF5 180 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 DCDC2Q9UHG0 476 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 LGALS13Q9UHV8 139 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 SSUH2Q9Y2M2 353 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 TNPO3Q9Y5L0 923 aaKnown RBP15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 EPG5Q9HCE0 2579 aa15.16■□□□□ 0.02
CCDC28A-201ENST00000332797 MDC1Q14676 2089 aaKnown RBP15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 A0A1B0GX78 115 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 CCDC151A5D8V7 595 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 TXNDC9O14530 226 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 DSCR3O14972 297 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 H2AFYO75367 372 aaKnown RBP15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 MED26O95402 600 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 SBK3P0C264 359 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 EPB42P16452 691 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 KRT4P19013 534 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 EPORP19235 508 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 F8A1P23610 371 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 EEF1DP29692 281 aaKnown RBP15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 CXADRP78310 365 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 DCDP81605 110 aaKnown RBP15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 IRF8Q02556 426 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 SLC9A5Q14940 896 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 RBBP5Q15291 538 aaKnown RBP15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 PCBP2Q15366 365 aaKnown RBP eCLIP15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 MUM1Q2TAK8 710 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 SH2D5Q6ZV89 423 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 TMEM151AQ8N4L1 468 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 DTWD1Q8N5C7 304 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 CRELD1Q96HD1 420 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 RUFY1Q96T51 708 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 DPH2Q9BQC3 489 aaPredicted RBP15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 EFHD1Q9BUP0 239 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 TMEM109Q9BVC6 243 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 SARGQ9BW04 601 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 GEMIN8Q9NWZ8 242 aaKnown RBP15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 MRPS18BQ9Y676 258 aaKnown RBP15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 CFAP47Q6ZTR5 3102 aa15.15■□□□□ 0.02
CCDC28A-201ENST00000332797 A8MT66 165 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 C21orf140B9A014 251 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 C9J4A7 227 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 STX16-NPEPL1H3BU86 382 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 COPEO14579 308 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 STX16O14662 325 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 NDUFS4O43181 175 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 EFSO43281 561 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 KATNA1O75449 491 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 SERPIND1P05546 499 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 SLC35G6P0C7Q6 338 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 WT1P19544 449 aaPredicted RBP15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 TAC1P20366 129 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 CXCR2P25025 360 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 SCTRP47872 440 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 CYP4F2P78329 520 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 ZNF844Q08AG5 666 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 CHIT1Q13231 466 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 DOC2AQ14183 400 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 NKAIN1Q4KMZ8 207 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 FAM198BQ6UWH4 519 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 ZNF517Q6ZMY9 492 aaPredicted RBP15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 KRT78Q8N1N4 520 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 ANKRD53Q8N9V6 530 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 CAMKVQ8NCB2 501 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 SLC13A3Q8WWT9 602 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 PTCD3Q96EY7 689 aaKnown RBP15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 EHD1Q9H4M9 534 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 ITPR1Q14643 2758 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 TERTO14746 1132 aaKnown RBP15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 PRAMEF4O60810 478 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 ITGAXP20702 1163 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 CRHR1P34998 444 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 CCT5P48643 541 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 EMP3P54852 163 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 RPS15P62841 145 aaKnown RBP15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 GTF2H2Q13888 395 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 COL28A1Q2UY09 1125 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 GARNL3Q5VVW2 1013 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 PRAMEF9Q5VWM5 478 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 GTF2H2CQ6P1K8 395 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 TMIGD1Q6UXZ0 262 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 PKD1L2Q7Z442 2459 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 GOLGA7Q7Z5G4 137 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 TRABD2AQ86V40 505 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 SRRM1Q8IYB3 904 aaKnown RBP15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 PIAS4Q8N2W9 510 aaPredicted RBP15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 ENDOVQ8N8Q3 282 aaKnown RBP15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 ZSCAN1Q8NBB4 408 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 ZCCHC10Q8TBK6 192 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 STARD8Q92502 1023 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 ZBTB9Q96C00 473 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 TM4SF19Q96DZ7 209 aa15.14■□□□□ 0.01
CCDC28A-201ENST00000332797 MOCOSQ96EN8 888 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms