RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 SIGLEC11Q96RL6 698 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 LGMNQ99538 433 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 P2RY13Q9BPV8 354 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 EML4Q9HC35 981 aaKnown RBP11.49□□□□□ -0.57
SHMT2-201ENST00000328923 LYARQ9NX58 379 aaKnown RBP11.49□□□□□ -0.57
SHMT2-201ENST00000328923 MIOSQ9NXC5 875 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 MMP20O60882 483 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 IPO13O94829 963 aaKnown RBP11.48□□□□□ -0.57
SHMT2-201ENST00000328923 ARL4AP40617 200 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 FOXM1Q08050 763 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 CDH18Q13634 790 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 FCN2Q15485 313 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 AP5B1Q2VPB7 878 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 CLEC6AQ6EIG7 209 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 NAPEPLDQ6IQ20 393 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 CYHR1Q6ZMK1 362 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 KIAA0907Q7Z7F0 614 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-201ENST00000328923 NT5DC4Q86YG4 428 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 ZNF567Q8N184 647 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 C1orf127Q8N9H9 656 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 SETD9Q8NE22 299 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 TCEAL3Q969E4 200 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 C3orf30Q96M34 536 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 DPYSL5Q9BPU6 564 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 RBCK1Q9BYM8 510 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 BARHL1Q9BZE3 327 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 C3orf14Q9HBI5 128 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 BIN3Q9NQY0 253 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 SLAMF8Q9P0V8 285 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 MIOXQ9UGB7 285 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 FBXL2Q9UKC9 423 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 DNAH12Q6ZR08 3092 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 FNDC1Q4ZHG4 1894 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-201ENST00000328923 A0A075B6Q4 140 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 CXCL11O14625 94 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 TO15178 435 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 MFSD11O43934 449 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 TULP3O75386 442 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 APOC3P02656 99 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 ITGAMP11215 1152 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 OGNP20774 298 aaKnown RBP11.48□□□□□ -0.57
SHMT2-201ENST00000328923 CD72P21854 359 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 CASP2P42575 452 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 MAP2K3P46734 347 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 KCNJ5P48544 419 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 KCNQ1P51787 676 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 CXCR4P61073 352 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 RPL6Q02878 288 aaKnown RBP11.48□□□□□ -0.57
SHMT2-201ENST00000328923 HSF2Q03933 536 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 DUSP4Q13115 394 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 LGALSLQ3ZCW2 172 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-201ENST00000328923 PKDCCQ504Y2 493 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 LDLRAD1Q5T700 205 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 ENPP6Q6UWR7 440 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 LARP4Q71RC2 724 aaKnown RBP eCLIP11.48□□□□□ -0.577e-8■■□□□ 12.3
SHMT2-201ENST00000328923 GPR155Q7Z3F1 870 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 ADGRD2Q7Z7M1 963 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 OR52K1Q8NGK4 314 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 KCNA7Q96RP8 456 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 MRPL57Q9BQC6 102 aaKnown RBP11.48□□□□□ -0.57
SHMT2-201ENST00000328923 TRIM54Q9BYV2 358 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 POMKQ9H5K3 350 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 PTPRHQ9HD43 1115 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 DNAJB9Q9UBS3 223 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 PADI2Q9Y2J8 665 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 MAB21L2Q9Y586 359 aa11.48□□□□□ -0.57
SHMT2-201ENST00000328923 A8MXK9 166 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 ZBTB24O43167 697 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-201ENST00000328923 SELENOFO60613 162 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 F9P00740 461 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 ATP5F1P24539 256 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-201ENST00000328923 STARP49675 285 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 VEGFBP49765 207 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 HNMTP50135 292 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 P2RY4P51582 365 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 USP10Q14694 798 aaKnown RBP11.47□□□□□ -0.57
SHMT2-201ENST00000328923 ZNF284Q2VY69 593 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 COQ5Q5HYK3 327 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 JADE1Q6IE81 842 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 PROSER1Q86XN7 944 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 ZBTB8OSQ8IWT0 167 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 DTWD1Q8N5C7 304 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 FBXO30Q8TB52 745 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 SFT2D1Q8WV19 159 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 TSGA13Q96PP4 275 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 POLE3Q9NRF9 147 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 PKP3Q9Y446 797 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 ORC6Q9Y5N6 252 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 TRPM7Q96QT4 1865 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 BRCA2P51587 3418 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 IGKV6D-21A0A0A0MT36 114 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 A0A1B0GV90 55 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 SOWAHBA6NEL2 793 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 CNMDO75829 334 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 POMCP01189 267 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 IGHV2-70P01814 119 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 CKMT1AP12532 417 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 EDNRBP24530 442 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 ACADLP28330 430 aa11.47□□□□□ -0.57
SHMT2-201ENST00000328923 ZNF460Q14592 562 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms