RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 RUVBL1Q9Y265 456 aaKnown RBP13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 GFYI3L273 518 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 GRM6O15303 877 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 OLFM2O95897 454 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 EFEMP2O95967 443 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 CDH3P22223 829 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 KRT20P35900 424 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 MAGEA2P43356 314 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 BCAP31P51572 246 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 SLC35A2P78381 396 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 IL18R1Q13478 541 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 ZNF846Q147U1 533 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 PLEKHS1Q5SXH7 462 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 KIAA1614Q5VZ46 1190 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 FAM180BQ6P0A1 224 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 TRIM74Q86UV6 250 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 OR4A15Q8NGL6 344 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 ECHDC3Q96DC8 303 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 ZNF347Q96SE7 839 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 CARNS1A5YM72 827 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 LEFTY1O75610 366 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 POU2F1P14859 743 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 PDHA2P29803 388 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 CLK1P49759 484 aaKnown RBP13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 DGKEP52429 567 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 RPS13P62277 151 aaKnown RBP13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 RELAQ04206 551 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 INAQ16352 499 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 RNF165Q6ZSG1 346 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 EIF3MQ7L2H7 374 aaKnown RBP13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 OTOP2Q7RTS6 562 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 PAGE2Q7Z2X7 111 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 C2orf73Q8N5S3 287 aaPredicted RBP13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 UTP15Q8TED0 518 aaKnown RBP13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 SPASTQ9UBP0 616 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 PCDH7O60245 1069 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 SCN2BO60939 215 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 ATP6V1G1O75348 118 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 ARHGEF15O94989 841 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 MPC1LP0DKB6 136 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 PABPC1P11940 636 aaKnown RBP13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 HOXB9P17482 250 aaPredicted RBP13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 GPX2P18283 190 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 CD6P30203 668 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 HOXA9P31269 272 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 PTPN5P54829 565 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 MEF2AQ02078 507 aaPredicted RBP13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 NPRL3Q12980 569 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 GAB1Q13480 694 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 CAMK2GQ13555 558 aaPredicted RBP13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 MAD2L1BPQ15013 274 aaPredicted RBP13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 ZC3H12BQ5HYM0 836 aaKnown RBP13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 CDKL4Q5MAI5 379 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 KREMEN2Q8NCW0 462 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 OR5AK3PQ8NH89 298 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 HUS1BQ8NHY5 278 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 MCCC1Q96RQ3 725 aaPredicted RBP13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 ADPRHL2Q9NX46 363 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 ACSL6Q9UKU0 697 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 HS3ST2Q9Y278 367 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 PCDHB11Q9Y5F2 797 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 IGLV3-16A0A075B6K0 115 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 M0R129 80 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 PCDHGA12O60330 932 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 ACRP10323 421 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 CD36P16671 472 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 CYP4F2P78329 520 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 DNASE1L3Q13609 305 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 DGUOKQ16854 277 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 ZNF284Q2VY69 593 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 ERICH5Q6P6B1 374 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 CHPT1Q8WUD6 406 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 PROX1Q92786 737 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 VOPP1Q96AW1 172 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 TAMM41Q96BW9 452 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 WRAP53Q9BUR4 548 aaKnown RBP13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 POLE4Q9NR33 117 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 FAM120CQ9NX05 1096 aaKnown RBP13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 STOX2Q9P2F5 926 aaPredicted RBP13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 ITM2BQ9Y287 266 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 FADS2P1A8MWK0 482 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 TTC34A8MYJ7 566 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 FGF18O76093 207 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 TGFB1P01137 390 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 CATP04040 527 aaKnown RBP13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 ETFAP13804 333 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 C21orf33P30042 268 aaPredicted RBP13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 MTAPQ13126 283 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 ACOX1Q15067 660 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 MPP7Q5T2T1 576 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 ZNF852Q6ZMS4 543 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 CBLL1Q75N03 491 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 ANKRD33Q7Z3H0 272 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 CCDC71Q8IV32 467 aaPredicted RBP13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 CPXM2Q8N436 756 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 OR2A12Q8NGT7 310 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 OR4K3Q96R72 315 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 TMEM121BQ9BXQ6 578 aaPredicted RBP13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 DUSP21Q9H596 190 aa13.55□□□□□ -0.24
ATP2C1-201ENST00000328560 ANAPC1Q9H1A4 1944 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms