RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 ERVK-11Q9UQG0 969 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 KLHL20Q9Y2M5 609 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 SPTY2D1-AS1A0A0U1RR47 76 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 YY2O15391 372 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 LCMT2O60294 686 aaKnown RBP17.69■□□□□ 0.42
USP39-201ENST00000323701 MAOBP27338 520 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 MTPNP58546 118 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 SLC34A1Q06495 639 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 HIST2H2ACQ16777 129 aaPredicted RBP17.69■□□□□ 0.42
USP39-201ENST00000323701 PGS1Q32NB8 556 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 HIST2H2AA3Q6FI13 130 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 PHACTR4Q8IZ21 702 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 FBXL6Q8N531 539 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 OR4E2Q8NGC2 313 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 OR4K1Q8NGD4 311 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 REPS1Q96D71 796 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 INPP5KQ9BT40 448 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 SYNPO2LQ9H987 977 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 GPR27Q9NS67 375 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 EGFL7Q9UHF1 273 aa17.69■□□□□ 0.42
USP39-201ENST00000323701 EXO1Q9UQ84 846 aaKnown RBP17.69■□□□□ 0.42
USP39-201ENST00000323701 RUVBL1Q9Y265 456 aaKnown RBP17.69■□□□□ 0.42
USP39-201ENST00000323701 DYTNA2CJ06 578 aa17.68■□□□□ 0.42
USP39-201ENST00000323701 IL6P05231 212 aa17.68■□□□□ 0.42
USP39-201ENST00000323701 DCNP07585 359 aaKnown RBP17.68■□□□□ 0.42
USP39-201ENST00000323701 ACPPP15309 386 aa17.68■□□□□ 0.42
USP39-201ENST00000323701 OXTRP30559 389 aa17.68■□□□□ 0.42
USP39-201ENST00000323701 MAPKAPK3Q16644 382 aa17.68■□□□□ 0.42
USP39-201ENST00000323701 PUS10Q3MIT2 529 aaKnown RBP17.68■□□□□ 0.42
USP39-201ENST00000323701 WASH2PQ6VEQ5 465 aa17.68■□□□□ 0.42
USP39-201ENST00000323701 COMMD6Q7Z4G1 85 aa17.68■□□□□ 0.42
USP39-201ENST00000323701 IFNEQ86WN2 208 aa17.68■□□□□ 0.42
USP39-201ENST00000323701 TRNAU1APQ9NX07 287 aaKnown RBP17.68■□□□□ 0.42
USP39-201ENST00000323701 DGKBQ9Y6T7 804 aa17.68■□□□□ 0.42
USP39-201ENST00000323701 STK25O00506 426 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 BAG2O95816 211 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 ANXA4P09525 319 aaPredicted RBP17.67■□□□□ 0.42
USP39-201ENST00000323701 MAPK1P28482 360 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 CDKN2CP42773 168 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 CSNK1G2P78368 415 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 PRDX1Q06830 199 aaKnown RBP17.67■□□□□ 0.42
USP39-201ENST00000323701 FOXM1Q08050 763 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 LAPTM5Q13571 262 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 PWP1Q13610 501 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 OR4F3Q6IEY1 312 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 JADE3Q92613 823 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 CGREF1Q99674 301 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 PELI2Q9HAT8 420 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 SLC6A20Q9NP91 592 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 DMTF1Q9Y222 760 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 ZNF217O75362 1048 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 STATHP02808 62 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 WNT1P04628 370 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 F3P13726 295 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 EFNA1P20827 205 aaPredicted RBP17.67■□□□□ 0.42
USP39-201ENST00000323701 ATP6V1B2P21281 511 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 PTPN6P29350 595 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 PIK3CBP42338 1070 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 GSK3BP49841 420 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 CCR8P51685 355 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 HKDC1Q2TB90 917 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 PRMT9Q6P2P2 845 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 FAM110BQ8TC76 370 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 TESCQ96BS2 214 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 SHDQ96IW2 340 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 KIR3DX1Q9H7L2 352 aa17.67■□□□□ 0.42
USP39-201ENST00000323701 ZNF839A8K0R7 811 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 PCDH7O60245 1069 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 FKBP6O75344 327 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 GSNP06396 782 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 HSD17B1P14061 328 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 TIA1P31483 386 aaKnown RBP eCLIP17.66■□□□□ 0.42
USP39-201ENST00000323701 WNT3P56703 355 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 AP2B1P63010 937 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 REEP5Q00765 189 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 LIPEQ05469 1076 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 C1orf61Q13536 156 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 AAGABQ6PD74 315 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 PJA1Q8NG27 643 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 GPBAR1Q8TDU6 330 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 MIEF2Q96C03 454 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 AURKBQ96GD4 344 aaPredicted RBP17.66■□□□□ 0.42
USP39-201ENST00000323701 PCBD2Q9H0N5 130 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 AASDHPPTQ9NRN7 309 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 ARHGAP10A1A4S6 786 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 RTCAO00442 366 aaKnown RBP17.66■□□□□ 0.42
USP39-201ENST00000323701 BTN3A3O00478 584 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 SCN2BO60939 215 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 LAMP1P11279 417 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 S100A3P33764 101 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 SPIN4Q56A73 249 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 PRPF38BQ5VTL8 546 aaKnown RBP17.66■□□□□ 0.42
USP39-201ENST00000323701 GALNT18Q6P9A2 607 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 ADCK2Q7Z695 626 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 KRT78Q8N1N4 520 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 C10orf111Q8N326 155 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.66■□□□□ 0.42
USP39-201ENST00000323701 LCN9Q8WX39 176 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 F2RL3Q96RI0 385 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 MACROD1Q9BQ69 325 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms