RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 EHD1Q9H4M9 534 aa15.25■□□□□ 0.03
SMARCD2-202ENST00000323347 TPT1P8Q9HAU6 139 aa15.25■□□□□ 0.03
SMARCD2-202ENST00000323347 FANCEQ9HB96 536 aa15.25■□□□□ 0.03
SMARCD2-202ENST00000323347 PLGRKTQ9HBL7 147 aa15.25■□□□□ 0.03
SMARCD2-202ENST00000323347 ORC6Q9Y5N6 252 aa15.25■□□□□ 0.03
SMARCD2-202ENST00000323347 RNASET2O00584 256 aaKnown RBP15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 ZNF197O14709 1029 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 ZSCAN9O15535 394 aaPredicted RBP15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 C1QCP02747 245 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 CYP17A1P05093 508 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 IL7RP16871 459 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 ITIH1P19827 911 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 EEF1B2P24534 225 aaKnown RBP15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 TIA1P31483 386 aaKnown RBP eCLIP15.24■□□□□ 0.032e-8■■■■■ 27.3
SMARCD2-202ENST00000323347 BDKRB1P46663 353 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 GJA8P48165 433 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 CXCR4P61073 352 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 UBE3AQ05086 875 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 CPTPQ5TA50 214 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 MED27Q6P2C8 311 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 CLECL1Q8IZS7 167 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 C1orf52Q8N6N3 182 aaKnown RBP15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 TMIEQ8NEW7 156 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 VPS37AQ8NEZ2 397 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 HUS1BQ8NHY5 278 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 ZFP90Q8TF47 636 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 ZNF480Q8WV37 535 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 LTB4R2Q9NPC1 389 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 ABCG2Q9UNQ0 655 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 TSC22D4Q9Y3Q8 395 aa15.24■□□□□ 0.03
SMARCD2-202ENST00000323347 DOCK6Q96HP0 2047 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 C17orf113A0A1B0GUU1 675 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 DLL1O00548 723 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 PRNPP04156 253 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 FABP3P05413 133 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 ANXA4P09525 319 aaPredicted RBP15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 PDHA2P29803 388 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 IRS1P35568 1242 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 ARHGDIAP52565 204 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 NTHL1P78549 312 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 DPTQ07507 201 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 CDK5R2Q13319 367 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 GRIN2CQ14957 1233 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 CAPN13Q6MZZ7 669 aaPredicted RBP15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 LRRC56Q8IYG6 542 aaPredicted RBP15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 CELF5Q8N6W0 485 aaKnown RBP15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 SETD9Q8NE22 299 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 VN1R2Q8NFZ6 395 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 RAB2BQ8WUD1 216 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 POF1BQ8WVV4 589 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 FOXJ1Q92949 421 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 MUL1Q969V5 352 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 MED8Q96G25 268 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 LRRC3BQ96PB8 259 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 RAD9AQ99638 391 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 BHLHE41Q9C0J9 482 aaPredicted RBP15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 ADNPQ9H2P0 1102 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 EXO1Q9UQ84 846 aaKnown RBP15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 HEMK1Q9Y5R4 338 aaPredicted RBP15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 H3BM21 787 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 SLC1A7O00341 560 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 JRKO75564 520 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 ZNF682O95780 498 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 FGBP02675 491 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 NPPBP16860 134 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 JUNDP17535 347 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 IGFBP5P24593 272 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 ITGB7P26010 798 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 HPCAL1P37235 193 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 DAPP51397 102 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 TPD52P55327 224 aaPredicted RBP15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 ITGA1P56199 1179 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 PPP1R8Q12972 351 aaKnown RBP15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 CEP68Q76N32 757 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 NPAS3Q8IXF0 933 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 NEIL2Q969S2 332 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 SH3KBP1Q96B97 665 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 C7orf34Q96L11 122 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 EFCAB11Q9BUY7 163 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 ZCCHC2Q9C0B9 1178 aaKnown RBP15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 NAA50Q9GZZ1 169 aaKnown RBP15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 LHPPQ9H008 270 aa15.23■□□□□ 0.03
SMARCD2-202ENST00000323347 ZBBXA8MT70 800 aa15.22■□□□□ 0.03
SMARCD2-202ENST00000323347 BCKDKO14874 412 aa15.22■□□□□ 0.03
SMARCD2-202ENST00000323347 PAPLNO95428 1278 aa15.22■□□□□ 0.03
SMARCD2-202ENST00000323347 CPSF4O95639 269 aaKnown RBP15.22■□□□□ 0.03
SMARCD2-202ENST00000323347 INHBBP09529 407 aa15.22■□□□□ 0.03
SMARCD2-202ENST00000323347 ADH5P11766 374 aa15.22■□□□□ 0.03
SMARCD2-202ENST00000323347 CEBPBP17676 345 aa15.22■□□□□ 0.03
SMARCD2-202ENST00000323347 CCNA2P20248 432 aa15.22■□□□□ 0.03
SMARCD2-202ENST00000323347 PCMT1P22061 227 aa15.22■□□□□ 0.03
SMARCD2-202ENST00000323347 PCGF2P35227 344 aa15.22■□□□□ 0.03
SMARCD2-202ENST00000323347 ST8SIA6P61647 398 aa15.22■□□□□ 0.03
SMARCD2-202ENST00000323347 VLDLRP98155 873 aa15.22■□□□□ 0.03
SMARCD2-202ENST00000323347 ELOAQ14241 798 aaKnown RBP15.22■□□□□ 0.03
SMARCD2-202ENST00000323347 ETFBKMTQ8IXQ9 262 aa15.22■□□□□ 0.03
SMARCD2-202ENST00000323347 LZICQ8WZA0 190 aa15.22■□□□□ 0.03
SMARCD2-202ENST00000323347 FKBP10Q96AY3 582 aa15.22■□□□□ 0.03
SMARCD2-202ENST00000323347 ZNF514Q96K75 400 aaPredicted RBP15.22■□□□□ 0.03
SMARCD2-202ENST00000323347 ITM2CQ9NQX7 267 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms