RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 RPS6KA6Q9UK32 745 aa7.55□□□□□ -1.2
CD46-201ENST00000322875 SLC6A14Q9UN76 642 aa7.55□□□□□ -1.2
CD46-201ENST00000322875 FAM50BQ9Y247 325 aa7.55□□□□□ -1.2
CD46-201ENST00000322875 PADI2Q9Y2J8 665 aa7.55□□□□□ -1.2
CD46-201ENST00000322875 HYKKA2RU49 373 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 WASHC1A8K0Z3 465 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 H3BM21 787 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 PLOD3O60568 738 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 CSF2P04141 144 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 MSL3P1P0C860 447 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 SLC2A4P14672 509 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 EVI2BP34910 448 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 TGM4P49221 684 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 B2MP61769 119 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 SLC10A7Q0GE19 358 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 VMACQ2NL98 169 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 SV2CQ496J9 727 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 ZNF628Q5EBL2 1059 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 RGMBQ6NW40 437 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 SLC27A1Q6PCB7 646 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 KIAA1324Q6UXG2 1013 aaKnown RBP7.54□□□□□ -1.2
CD46-201ENST00000322875 PRSS42Q7Z5A4 293 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 GPSM1Q86YR5 675 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 ZNF683Q8IZ20 524 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 DOCK4Q8N1I0 1966 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 GHDCQ8N2G8 530 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 CLDN22Q8N7P3 220 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 ZNF680Q8NEM1 530 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 CD200R1Q8TD46 325 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 CCM2Q9BSQ5 444 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 CNPPD1Q9BV87 410 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 PPP1R3EQ9H7J1 279 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 SLC25A19Q9HC21 320 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 ABCB9Q9NP78 766 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 RNF19AQ9NV58 838 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 RBFOX1Q9NWB1 397 aaKnown RBP7.54□□□□□ -1.2
CD46-201ENST00000322875 NDUFB11Q9NX14 153 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 MS4A12Q9NXJ0 267 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 ING3Q9NXR8 418 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 MRPL39Q9NYK5 338 aaKnown RBP7.54□□□□□ -1.2
CD46-201ENST00000322875 ERAP1Q9NZ08 941 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 NUDT4Q9NZJ9 180 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 MAPRE3Q9UPY8 281 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 CSNK1G3Q9Y6M4 447 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 SRCAPQ6ZRS2 3230 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 SH3D21A4FU49 640 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 ATP6V1G2-DDX39BF2Z307 99 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 SMLR1H3BR10 107 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 FZD9O00144 591 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 MYL12BO14950 172 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 IRAK2O43187 625 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 SLC43A1O75387 559 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 PAGE1O75459 146 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 PDE9AO76083 593 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 CYP17A1P05093 508 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 TXNP10599 105 aaKnown RBP7.54□□□□□ -1.2
CD46-201ENST00000322875 GPX2P18283 190 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 MYL12AP19105 171 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 TNNI3P19429 210 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 CFL1P23528 166 aaKnown RBP7.54□□□□□ -1.2
CD46-201ENST00000322875 RENBPP51606 427 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 ZNF140P52738 457 aaPredicted RBP7.54□□□□□ -1.2
CD46-201ENST00000322875 MAXP61244 160 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 ABATP80404 500 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 EIF2B5Q13144 721 aaKnown RBP7.54□□□□□ -1.2
CD46-201ENST00000322875 C18orf21Q32NC0 220 aaPredicted RBP7.54□□□□□ -1.2
CD46-201ENST00000322875 CTSL3PQ5NE16 218 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 PLAG1Q6DJT9 500 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 NADSYN1Q6IA69 706 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 ZNF605Q86T29 641 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 UMODL1-AS1Q8N2C9 162 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 TMEM132CQ8N3T6 1108 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 VANGL1Q8TAA9 524 aaPredicted RBP7.54□□□□□ -1.2
CD46-201ENST00000322875 EEF1AKMT1Q8WVE0 214 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 GIMAP1Q8WWP7 306 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 ZBED6CLQ96FA7 236 aaPredicted RBP7.54□□□□□ -1.2
CD46-201ENST00000322875 C8orf48Q96LL4 319 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 TSEN34Q9BSV6 310 aaKnown RBP7.54□□□□□ -1.2
CD46-201ENST00000322875 CHST8Q9H2A9 424 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 AGO3Q9H9G7 860 aaKnown RBP7.54□□□□□ -1.2
CD46-201ENST00000322875 AS3MTQ9HBK9 375 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 NT5MQ9NPB1 228 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 ZNF219Q9P2Y4 722 aaPredicted RBP7.54□□□□□ -1.2
CD46-201ENST00000322875 NDRG2Q9UN36 371 aaKnown RBP7.54□□□□□ -1.2
CD46-201ENST00000322875 AKT3Q9Y243 479 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 MOXD2PA6NHM9 499 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 J3KR12 359 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 RGS5O15539 181 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 RGS14O43566 566 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 FZD6O60353 706 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 HCN1O60741 890 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 RFPL3O75679 317 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 RECQL4O94761 1208 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 B3GALT4O96024 378 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 TPOP07202 933 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 FHP07954 510 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 SLC10A3P09131 477 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 HSMCR30P0CW71 290 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 CLDN8P56748 225 aa7.54□□□□□ -1.2
CD46-201ENST00000322875 CYP4F2P78329 520 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms