RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 GAD1Q99259 594 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 PRDM12Q9H4Q4 367 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 PAQR5Q9NXK6 330 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-201ENST00000322507 GLTPQ9NZD2 209 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 HCRTR2O43614 444 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 NFATC1O95644 943 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 NDUFS1P28331 727 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 NSG1P42857 185 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 GABRA2P47869 451 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 BLKP51451 505 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 PSMA6P60900 246 aaKnown RBP9.48□□□□□ -0.89
COL12A1-201ENST00000322507 COL19A1Q14993 1142 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 VAMP3Q15836 100 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 PIGZQ86VD9 579 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 ZNF527Q8NB42 609 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 TRAPPC12Q8WVT3 735 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 CSPG4P5Q96PW8 444 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 MTG2Q9H4K7 406 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 ITM2CQ9NQX7 267 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 SLC35G6P0C7Q6 338 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 SF1Q15637 639 aaKnown RBP9.48□□□□□ -0.89
COL12A1-201ENST00000322507 FXNQ16595 210 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 C9orf57Q5W0N0 161 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 OR6Q1Q8NGQ2 317 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 MTERF1Q99551 399 aaKnown RBP9.48□□□□□ -0.89
COL12A1-201ENST00000322507 AGO3Q9H9G7 860 aaKnown RBP9.48□□□□□ -0.89
COL12A1-201ENST00000322507 RPL36Q9Y3U8 105 aaKnown RBP9.48□□□□□ -0.89
COL12A1-201ENST00000322507 ENDOD1O94919 500 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 GOT1P17174 413 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 PTGER3P43115 390 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 PCDH20Q8N6Y1 951 aaKnown RBP9.48□□□□□ -0.89
COL12A1-201ENST00000322507 CHTF18Q8WVB6 975 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 AARSD1Q9BTE6 412 aaKnown RBP9.48□□□□□ -0.89
COL12A1-201ENST00000322507 TTPALQ9BTX7 342 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 ACOX3O15254 700 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 TBL1XO60907 577 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 EVI2BP34910 448 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 PFKPQ01813 784 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 FOXM1Q08050 763 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 NOL9Q5SY16 702 aaKnown RBP9.48□□□□□ -0.89
COL12A1-201ENST00000322507 UBE2R2Q712K3 238 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-201ENST00000322507 TM9SF4Q92544 642 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 SNAPC3Q92966 411 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 HLA-CQ95604 372 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 TECTBQ96PL2 329 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 HSD17B14Q9BPX1 270 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 ENY2Q9NPA8 101 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 ACTR3BQ9P1U1 418 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 ATG4BQ9Y4P1 393 aa9.48□□□□□ -0.89
COL12A1-201ENST00000322507 CLIC1O00299 241 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 ZBTB48P10074 688 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 WSCD1Q658N2 575 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 PNLDC1Q8NA58 520 aaKnown RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 OR8D2Q9GZM6 311 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 ASF1AQ9Y294 204 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 GLYATL1P3A0A0U1RQE8 302 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 ATP6AP2A0A1C7CYW4 349 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 TLR5O60602 858 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 ATP6AP2O75787 350 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 CD247P20963 164 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 EIF2DP41214 584 aaKnown RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 CDH8P55286 799 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 MERTKQ12866 999 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 UGT3A2Q3SY77 523 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 CATSPERGQ6ZRH7 1159 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 TRIM46Q7Z4K8 759 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 VRK1Q99986 396 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 SGK2Q9HBY8 427 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 STUB1Q9UNE7 303 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 A0A1B0GV72 72 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 GSC2O15499 205 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 NAE1Q13564 534 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 FASTKD3Q14CZ7 662 aaKnown RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 HSPBAP1Q96EW2 488 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 GLOD4Q9HC38 313 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 NOP16Q9Y3C1 178 aaKnown RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 IFNA5P01569 189 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 GRIA2P42262 883 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 PPP3CAQ08209 521 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 ZC3H14Q6PJT7 736 aaKnown RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 DEDD2Q8WXF8 326 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 INPP4AQ96PE3 977 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 GPER1Q99527 375 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 VNN3Q9NY84 501 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 SLC7A8Q9UHI5 535 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 DCLK1O15075 740 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 MC4RP32245 332 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 SCNN1AP37088 669 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 ENTPD1P49961 510 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 SLC25A3Q00325 362 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 OR1J4Q8NGS1 313 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 GRIN3AQ8TCU5 1115 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 SLC7A6OSQ96CW6 309 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 RIPOR3Q96MK2 946 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 PCDHAC1Q9H158 963 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 CDK5RAP2Q96SN8 1893 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 IRAK2O43187 625 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 PRAMEF2O60811 474 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 RPS9P46781 194 aaKnown RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 QPCTQ16769 361 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms