RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 HNRNPA0Q13151 305 aaKnown RBP16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 EPGNQ6UW88 154 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 Q8N402 240 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 TOR1AIP2Q8NFQ8 470 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 HSH2DQ96JZ2 352 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 NT5C1B-RDH14C9J2C7 533 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 COQ9O75208 318 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 CBSLP0DN79 551 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 FOXN2P32314 431 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 CBSP35520 551 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 TUSC3Q13454 348 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 TGFBIQ15582 683 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 UGCGQ16739 394 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 DUS1LQ6P1R4 473 aaKnown RBP16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 CATSPERGQ6ZRH7 1159 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 CHST9Q7L1S5 443 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 SLC16A9Q7RTY1 509 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 ARL14Q8N4G2 192 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 SAMD12Q8N8I0 201 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 FAXDC2Q96IV6 333 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 XRCC1P18887 633 aaPredicted RBP16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 TCEA1P23193 301 aaKnown RBP16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 PSRC1Q6PGN9 363 aaPredicted RBP16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 AKT1S1Q96B36 256 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 SLC22A18Q96BI1 424 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 PTPN18Q99952 460 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 MYOCQ99972 504 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 ERVK-11Q9UQG0 969 aa16.42■□□□□ 0.22
SMCHD1-201ENST00000320876 A0A1W2PP18 115 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 NFATC1O95644 943 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 OR1D2P34982 312 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 HCAR3P49019 387 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 RPLP0P6Q8NHW5 317 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 OR5B12Q96R08 314 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 TTYH2Q9BSA4 534 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 EXOSC1Q9Y3B2 195 aaKnown RBP16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 E2F3O00716 465 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 C4BPAP04003 597 aaKnown RBP16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 OR5T2Q8NGG2 359 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 H7C417 338 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 OR14K1Q8NGZ2 314 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 E7EQ34 232 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 LYPLA2O95372 231 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 IFNA1P01562 189 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 CDH15P55291 814 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 ABRAXAS2Q15018 415 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 TATDN1Q6P1N9 297 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 GALNT11Q8NCW6 608 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 TMEM68Q96MH6 324 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 PBDC1Q9BVG4 233 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 HTR3EA5X5Y0 456 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 CD48P09326 243 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 PRKCHP24723 683 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 AMZ2Q86W34 360 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 LNX2Q8N448 690 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 PKP2Q99959 881 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 MCCC2Q9HCC0 563 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 COPZ2Q9P299 210 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 KLF11O14901 512 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 B4GALT5O43286 388 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 UGT8Q16880 541 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 SLCO2A1Q92959 643 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 MKS1Q9NXB0 559 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 PLGP00747 810 aaPredicted RBP16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 CD52P31358 61 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 ST3GAL3Q11203 375 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 RAB39AQ14964 217 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 C3orf33Q6P1S2 294 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 METTL25Q8N6Q8 603 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 OR8S1Q8NH09 359 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 SLC25A36Q96CQ1 311 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 RPF2Q9H7B2 306 aaKnown RBP16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 TMEM185BQ9H7F4 350 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 DEC1Q9P2X7 70 aa16.41■□□□□ 0.22
SMCHD1-201ENST00000320876 ENPP3O14638 875 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 HSPA12AO43301 675 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 BCHEP06276 602 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 GPR68Q15743 365 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 UBXN11Q5T124 520 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 CEACAM20Q6UY09 585 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 ANKRD23Q86SG2 305 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 ZSCAN1Q8NBB4 408 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 ARMC5Q96C12 935 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 GTF2IRD1Q9UHL9 959 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 FBXW11Q9UKB1 542 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 NDUFS4O43181 175 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 CKMT2P17540 419 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 CCND3P30281 292 aaPredicted RBP16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 TMEM220Q6QAJ8 160 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 OR14C36Q8NHC7 312 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 PARPBPQ9NWS1 579 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 C2CD4BA6NLJ0 364 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 FPR1P21462 350 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 EGFL6Q8IUX8 553 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 UPF1Q92900 1129 aaKnown RBP eCLIP16.4■□□□□ 0.221e-6■■■■□ 26.1
SMCHD1-201ENST00000320876 TMEM121BQ9BXQ6 578 aaPredicted RBP16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 PCDH10Q9P2E7 1040 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 DGKGP49619 791 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 RPS3AP61247 264 aaKnown RBP16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 FADDQ13158 208 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms