RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 RFWD2Q8NHY2 731 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 SELENOMQ8WWX9 145 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 C19orf60Q96EN9 201 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 PRR11Q96HE9 360 aaPredicted RBP13.04□□□□□ -0.32
PRPF18-201ENST00000320054 ELAC2Q9BQ52 826 aaKnown RBP13.04□□□□□ -0.32
PRPF18-201ENST00000320054 NUDT22Q9BRQ3 303 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 MEAF6Q9HAF1 191 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 BRF2Q9HAW0 419 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 KCNK13Q9HB14 408 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 APOBEC2Q9Y235 224 aaKnown RBP13.04□□□□□ -0.32
PRPF18-201ENST00000320054 KLHL20Q9Y2M5 609 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 PCDHGA4Q9Y5G9 962 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 AP1M2Q9Y6Q5 423 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 IGHV5-51A0A0C4DH38 117 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 FEZF1A0PJY2 475 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 ANKDD1BA6NHY2 528 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 NPIPB8E9PQR5 432 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 SLC28A1O00337 649 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 PIP5K1BO14986 540 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 OR1F1O43749 312 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 LCMT2O60294 686 aaKnown RBP13.03□□□□□ -0.32
PRPF18-201ENST00000320054 SNX3O60493 162 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 VPS4BO75351 444 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 SKAP2O75563 359 aaPredicted RBP13.03□□□□□ -0.32
PRPF18-201ENST00000320054 PDYNP01213 254 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 JUNP05412 331 aaKnown RBP13.03□□□□□ -0.32
PRPF18-201ENST00000320054 HOXB3P14651 431 aaPredicted RBP13.03□□□□□ -0.32
PRPF18-201ENST00000320054 AQP5P55064 265 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 E2F1Q01094 437 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 ABRAXAS2Q15018 415 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 RBBP5Q15291 538 aaKnown RBP13.03□□□□□ -0.32
PRPF18-201ENST00000320054 ZIC1Q15915 447 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 XKR7Q5GH72 579 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 ZC3H12BQ5HYM0 836 aaKnown RBP13.03□□□□□ -0.32
PRPF18-201ENST00000320054 ZNF574Q6ZN55 896 aaPredicted RBP13.03□□□□□ -0.32
PRPF18-201ENST00000320054 DDIASQ8IXT1 998 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.03□□□□□ -0.32
PRPF18-201ENST00000320054 ANKRD53Q8N9V6 530 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 HUS1BQ8NHY5 278 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 ZNF473Q8WTR7 871 aaKnown RBP13.03□□□□□ -0.32
PRPF18-201ENST00000320054 KLHL6Q8WZ60 621 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 CCT6BQ92526 530 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 MAELQ96JY0 434 aaKnown RBP13.03□□□□□ -0.32
PRPF18-201ENST00000320054 GFM1Q96RP9 751 aaKnown RBP13.03□□□□□ -0.32
PRPF18-201ENST00000320054 ZFYVE21Q9BQ24 234 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 NUF2Q9BZD4 464 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 ZMYND15Q9H091 742 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 FAM107BQ9H098 131 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 FARSBQ9NSD9 589 aaKnown RBP13.03□□□□□ -0.32
PRPF18-201ENST00000320054 ZFP69BQ9UJL9 534 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 BTRCQ9Y297 605 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 CCL27Q9Y4X3 112 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 PCDHGA1Q9Y5H4 931 aa13.03□□□□□ -0.32
PRPF18-201ENST00000320054 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.02□□□□□ -0.33
PRPF18-201ENST00000320054 D6RAR5 112 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 SDHDO14521 159 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 MAP3K7O43318 606 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 RGS14O43566 566 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 NRP2O60462 931 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 CTSVO60911 334 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 CLEC3AO75596 197 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 RASSF9O75901 435 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 LINC00032P0C843 101 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 THRAP10827 490 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 PCNAP12004 261 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 PRPH2P23942 346 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 BCL6P41182 706 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 IDH3AP50213 366 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 NEK2P51955 445 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 ARFIP2P53365 341 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 TRA2AQ13595 282 aaKnown RBP eCLIP13.02□□□□□ -0.33
PRPF18-201ENST00000320054 SPIDRQ14159 915 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 FAM219BQ5XKK7 198 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 TMPRSS9Q7Z410 1059 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 VN1R5Q7Z5H4 357 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 PLD3Q8IV08 490 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 DNAJC22Q8N4W6 341 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 TRPV3Q8NET8 790 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 ACTRT2Q8TDY3 377 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 C10orf82Q8WW14 230 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 THOC1Q96FV9 657 aaKnown RBP13.02□□□□□ -0.33
PRPF18-201ENST00000320054 METTL2AQ96IZ6 378 aaKnown RBP13.02□□□□□ -0.33
PRPF18-201ENST00000320054 SLC41A2Q96JW4 573 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 OR2A5Q96R48 311 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 CCDC28BQ9BUN5 200 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 KLHL25Q9H0H3 589 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 ZNF768Q9H5H4 540 aaKnown RBP13.02□□□□□ -0.33
PRPF18-201ENST00000320054 PDE7BQ9NP56 450 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 DMRT3Q9NQL9 472 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 RIC8BQ9NVN3 520 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 TMEM9Q9P0T7 183 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 DCTN4Q9UJW0 460 aa13.02□□□□□ -0.33
PRPF18-201ENST00000320054 ATXN7L1Q9ULK2 861 aaPredicted RBP13.02□□□□□ -0.33
PRPF18-201ENST00000320054 A0A0G2JND7 137 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 IGHV5-10-1A0A0J9YXX1 117 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 MAGEB17A8MXT2 336 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 CASC3O15234 703 aaKnown RBP13.01□□□□□ -0.33
PRPF18-201ENST00000320054 DIAPH2O60879 1101 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 RFPL3O75679 317 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 MSL3P1P0C860 447 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms