RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 SCML1Q9UN30 329 aa13.42□□□□□ -0.26
VAMP2-201ENST00000316509 ZFC3H1O60293 1989 aaKnown RBP13.42□□□□□ -0.26
VAMP2-201ENST00000316509 UPK1AO00322 258 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 ETHE1O95571 254 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 ENGP17813 658 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 CDKN2CP42773 168 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 GSTM5P46439 218 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 GALK1P51570 392 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 ZNF763Q0D2J5 394 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 ADAM15Q13444 863 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 VMACQ2NL98 169 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 CATSPEREQ5SY80 951 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 FOXB2Q5VYV0 432 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 NAIF1Q69YI7 327 aaPredicted RBP13.41□□□□□ -0.26
VAMP2-201ENST00000316509 FAM83HQ6ZRV2 1179 aaPredicted RBP13.41□□□□□ -0.26
VAMP2-201ENST00000316509 ZNF621Q6ZSS3 439 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 PATL1Q86TB9 770 aaKnown RBP13.41□□□□□ -0.26
VAMP2-201ENST00000316509 ANKRD46Q86W74 232 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 ZCCHC7Q8N3Z6 543 aaKnown RBP13.41□□□□□ -0.26
VAMP2-201ENST00000316509 TSPAN14Q8NG11 270 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 FBXO30Q8TB52 745 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.41□□□□□ -0.266e-7■■■□□ 18.9
VAMP2-201ENST00000316509 ASB12Q8WXK4 309 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 SNX19Q92543 992 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 NCLNQ969V3 563 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 TIMM29Q9BSF4 260 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 C1QTNF2Q9BXJ5 285 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 YIPF3Q9GZM5 350 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 MYNNQ9NPC7 610 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 VPS4AQ9UN37 437 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 COL4A3Q01955 1670 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 PRKD3O94806 890 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 SEMA3DO95025 777 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 CST1P01037 141 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 GSNP06396 782 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 RXRGP48443 463 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 ARSFP54793 590 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 SFSWAPQ12872 951 aaKnown RBP13.41□□□□□ -0.26
VAMP2-201ENST00000316509 SGCGQ13326 291 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 THEMIS2Q5TEJ8 643 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 TMIGD1Q6UXZ0 262 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 GPR155Q7Z3F1 870 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 FAM129CQ86XR2 697 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 RNF175Q8N4F7 328 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 OR5K1Q8NHB7 308 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 MAGEE2Q8TD90 523 aaPredicted RBP13.41□□□□□ -0.26
VAMP2-201ENST00000316509 NETO1Q8TDF5 533 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 SMPDL3AQ92484 453 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 GFM2Q969S9 779 aaKnown RBP13.41□□□□□ -0.26
VAMP2-201ENST00000316509 TMBIM1Q969X1 311 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 AURKBQ96GD4 344 aaPredicted RBP13.41□□□□□ -0.26
VAMP2-201ENST00000316509 KXD1Q9BQD3 176 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 S1PR5Q9H228 398 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 WDR26Q9H7D7 661 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 AK5Q9Y6K8 562 aa13.41□□□□□ -0.26
VAMP2-201ENST00000316509 MKI67P46013 3256 aaKnown RBP13.4□□□□□ -0.26
VAMP2-201ENST00000316509 GNG14A0A1W2PPG7 69 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 G3V2T6 193 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 KCNK5O95279 499 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 ALBP02768 609 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 LAMP1P11279 417 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 SOX11P35716 441 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 KIR2DL1P43626 348 aaPredicted RBP13.4□□□□□ -0.26
VAMP2-201ENST00000316509 ADARB1P78563 741 aaKnown RBP13.4□□□□□ -0.26
VAMP2-201ENST00000316509 PDE7AQ13946 482 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 GK3PQ14409 553 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 PARM1Q6UWI2 310 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 ABRAXAS1Q6UWZ7 409 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 USP51Q70EK9 711 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 C17orf64Q86WR6 236 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 HIPK1Q86Z02 1210 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 ALDH16A1Q8IZ83 802 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 TP53I13Q8NBR0 393 aaPredicted RBP13.4□□□□□ -0.26
VAMP2-201ENST00000316509 NCSTNQ92542 709 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 GABRG3Q99928 467 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 RBM4BQ9BQ04 359 aaKnown RBP13.4□□□□□ -0.26
VAMP2-201ENST00000316509 AIF1LQ9BQI0 150 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 RBM4Q9BWF3 364 aaKnown RBP13.4□□□□□ -0.26
VAMP2-201ENST00000316509 RAB11FIP5Q9BXF6 653 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 RAD21L1Q9H4I0 556 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 TPT1P8Q9HAU6 139 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 PRM3Q9NNZ6 103 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 WASH6PQ9NQA3 447 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 PCDHGB4Q9UN71 923 aa13.4□□□□□ -0.26
VAMP2-201ENST00000316509 TCF20Q9UGU0 1960 aaKnown RBP13.4□□□□□ -0.26
VAMP2-201ENST00000316509 TRIM64A6NGJ6 449 aa13.39□□□□□ -0.27
VAMP2-201ENST00000316509 TRIM64CA6NLI5 447 aa13.39□□□□□ -0.27
VAMP2-201ENST00000316509 GNGT2O14610 69 aa13.39□□□□□ -0.27
VAMP2-201ENST00000316509 AHCYL1O43865 530 aa13.39□□□□□ -0.27
VAMP2-201ENST00000316509 BMP10O95393 424 aa13.39□□□□□ -0.27
VAMP2-201ENST00000316509 CPSF4O95639 269 aaKnown RBP13.39□□□□□ -0.27
VAMP2-201ENST00000316509 SERPINA1P01009 418 aa13.39□□□□□ -0.27
VAMP2-201ENST00000316509 FESP07332 822 aa13.39□□□□□ -0.27
VAMP2-201ENST00000316509 SLC35G4P0C7Q5 338 aa13.39□□□□□ -0.27
VAMP2-201ENST00000316509 MYCLP1P12525 358 aaPredicted RBP13.39□□□□□ -0.27
VAMP2-201ENST00000316509 PAX7P23759 505 aa13.39□□□□□ -0.27
VAMP2-201ENST00000316509 NTSR1P30989 418 aa13.39□□□□□ -0.27
VAMP2-201ENST00000316509 MAGEA2P43356 314 aa13.39□□□□□ -0.27
VAMP2-201ENST00000316509 RFX4Q33E94 735 aa13.39□□□□□ -0.27
VAMP2-201ENST00000316509 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms