RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CYP2U1Q7Z449 544 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 THOC6Q86W42 341 aaKnown RBP7.35□□□□□ -1.23
TRIM55-202ENST00000315962 PLD3Q8IV08 490 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 CPA6Q8N4T0 437 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 MFSD2AQ8NA29 543 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 ZFP90Q8TF47 636 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 COQ10AQ96MF6 247 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 ARPC5LQ9BPX5 153 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 MACROD1Q9BQ69 325 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 THUMPD3Q9BV44 507 aaKnown RBP7.35□□□□□ -1.23
TRIM55-202ENST00000315962 FUNDC2Q9BWH2 189 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 C1QTNF3Q9BXJ4 246 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 ZNF576Q9H609 170 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 XKR8Q9H6D3 395 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 LRTM1Q9HBL6 345 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 VAPAQ9P0L0 249 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 CCL27Q9Y4X3 112 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 PCDHB3Q9Y5E6 796 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 A0A1W2PP18 115 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 TCRBV5S2A0A599 114 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 TMEM221A6NGB7 291 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 OR52A4PA6NMU1 304 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 MAGEB17A8MXT2 336 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 GFYI3L273 518 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 GNGT2O14610 69 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 NUAK1O60285 661 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 SLCO2B1O94956 709 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 TGFB1P01137 390 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 FTH1P02794 183 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 HTR1AP08908 422 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 INHBBP09529 407 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 CYP2A7P20853 494 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 CD9P21926 228 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 FMO3P31513 532 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 LTBRP36941 435 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 GNPDA1P46926 289 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 ARSFP54793 590 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 VBP1P61758 197 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 DOC2AQ14183 400 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 RGS21Q2M5E4 152 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 ITPRIPL2Q3MIP1 535 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 ZNF362Q5T0B9 420 aaPredicted RBP7.34□□□□□ -1.23
TRIM55-202ENST00000315962 PIP5KL1Q5T9C9 394 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 INTS11Q5TA45 600 aaKnown RBP7.34□□□□□ -1.23
TRIM55-202ENST00000315962 LCN8Q6JVE9 175 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 C10orf111Q8N326 155 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 ABHD11Q8NFV4 315 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 NDNFQ8TB73 568 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 ZNF480Q8WV37 535 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 SORBS1Q9BX66 1292 aaKnown RBP7.34□□□□□ -1.23
TRIM55-202ENST00000315962 MARCH7Q9H992 704 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 NTN4Q9HB63 628 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 SLC52A3Q9NQ40 469 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 PAK1IP1Q9NWT1 392 aaPredicted RBP7.34□□□□□ -1.23
TRIM55-202ENST00000315962 STOX2Q9P2F5 926 aaPredicted RBP7.34□□□□□ -1.23
TRIM55-202ENST00000315962 MTCL1Q9Y4B5 1905 aaKnown RBP7.34□□□□□ -1.23
TRIM55-202ENST00000315962 C2orf16Q68DN1 1984 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 HS6ST1O60243 411 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 EGFP01133 1207 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 BCKDHAP12694 445 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 NAT1P18440 290 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 IMPA1P29218 277 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 TMED10P49755 219 aaKnown RBP7.34□□□□□ -1.23
TRIM55-202ENST00000315962 SLC13A2Q13183 592 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 RCAN2Q14206 197 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 SMN1Q16637 294 aaKnown RBP7.34□□□□□ -1.23
TRIM55-202ENST00000315962 DPY19L1Q2PZI1 675 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 TMEM53Q6P2H8 277 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 SPRED1Q7Z699 444 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 LSRQ86X29 649 aaPredicted RBP7.34□□□□□ -1.23
TRIM55-202ENST00000315962 CROCCP3Q8IVE0 287 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 ZNF557Q8N988 423 aaPredicted RBP7.34□□□□□ -1.23
TRIM55-202ENST00000315962 OR7A2PQ8NGA2 310 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 LZICQ8WZA0 190 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 HTRA1Q92743 480 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 RPL3LQ92901 407 aaKnown RBP7.34□□□□□ -1.23
TRIM55-202ENST00000315962 NCLNQ969V3 563 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 ROPN1LQ96C74 230 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 PPP1R16AQ96I34 528 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 NSMCE2Q96MF7 247 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 BARD1Q99728 777 aaKnown RBP7.34□□□□□ -1.23
TRIM55-202ENST00000315962 INPP5KQ9BT40 448 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 TRIM15Q9C019 465 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 SPNS1Q9H2V7 528 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 THAP10Q9P2Z0 257 aaPredicted RBP7.34□□□□□ -1.23
TRIM55-202ENST00000315962 ABCD2Q9UBJ2 740 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 WDR37Q9Y2I8 494 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 TSC22D4Q9Y3Q8 395 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 PCDHGA11Q9Y5H2 935 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 TRPM6Q9BX84 2022 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 FREM2Q5SZK8 3169 aa7.34□□□□□ -1.23
TRIM55-202ENST00000315962 A0A0G2JN53 185 aa7.34□□□□□ -1.24
TRIM55-202ENST00000315962 AQP12BA6NM10 295 aa7.34□□□□□ -1.24
TRIM55-202ENST00000315962 RGS14O43566 566 aa7.34□□□□□ -1.24
TRIM55-202ENST00000315962 CBFA2T3O75081 653 aa7.34□□□□□ -1.24
TRIM55-202ENST00000315962 BCAS1O75363 584 aaPredicted RBP7.34□□□□□ -1.24
TRIM55-202ENST00000315962 APODP05090 189 aa7.34□□□□□ -1.24
TRIM55-202ENST00000315962 ABCB1P08183 1280 aaPredicted RBP7.34□□□□□ -1.24
TRIM55-202ENST00000315962 PRR35P0CG20 571 aa7.34□□□□□ -1.24
TRIM55-202ENST00000315962 GSTT2P0CG29 244 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms