RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 OR6F1Q8NGZ6 308 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 HASPINQ8TF76 798 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 POF1BQ8WVV4 589 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 BORCS5Q969J3 196 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 ESAMQ96AP7 390 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 FAM149B1Q96BN6 582 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 FANCEQ9HB96 536 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 THEGQ9P2T0 379 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 PRKAG2Q9UGJ0 569 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 FER1L5A0AVI2 2057 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 A0A1B0GVM2 712 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 KMOO15229 486 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 B3GAT3O94766 335 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 SCELO95171 688 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 GLULP15104 373 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 HOXB6P17509 224 aaKnown RBP7.53□□□□□ -1.2
CNOT4-201ENST00000315544 FASP25445 335 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 THBS2P35442 1172 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 PIK3CBP42338 1070 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 ACSM1Q08AH1 577 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 BCL7AQ4VC05 210 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 FAM71E1Q6IPT2 247 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 RNF175Q8N4F7 328 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 TAMM41Q96BW9 452 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 SP140LQ9H930 580 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 TM9SF3Q9HD45 589 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 TLK1Q9UKI8 766 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 TMED5Q9Y3A6 229 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 KLK4Q9Y5K2 254 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 FRYQ5TBA9 3013 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 FOXE1O00358 373 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-201ENST00000315544 NR5A2O00482 541 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 PRMT3O60678 531 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 RAMP2O60895 175 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 PAMP19021 973 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 LPOP22079 712 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-201ENST00000315544 MC4RP32245 332 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 CTSOP43234 321 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-201ENST00000315544 TTPAP49638 278 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 LAPTM5Q13571 262 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 CLCA4Q14CN2 919 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 CCSMST1Q4G0I0 132 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 COX20Q5RI15 118 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 CASC4Q6P4E1 433 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 SLCO4C1Q6ZQN7 724 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 ETFBKMTQ8IXQ9 262 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 PHACTR4Q8IZ21 702 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 CFAP52Q8N1V2 620 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 DNAAF3Q8N9W5 541 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 CNIH3Q8TBE1 160 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 ASB15Q8WXK1 588 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 ELSPBP1Q96BH3 223 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 ST6GAL2Q96JF0 529 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 NECTIN4Q96NY8 510 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 OPALINQ96PE5 141 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 RHBGQ9H310 441 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 SEMA4BQ9NPR2 832 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-201ENST00000315544 MARCH2Q9P0N8 246 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 AASSQ9UDR5 926 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 CES1P1Q9UKY3 287 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 DUSP12Q9UNI6 340 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 RHBDD3Q9Y3P4 386 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 A0A0G2JMP0 313 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 ERN1O75460 977 aaKnown RBP7.52□□□□□ -1.21
CNOT4-201ENST00000315544 NUDT7P0C024 238 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 SRCP12931 536 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 PCSK2P16519 638 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 HLA-FP30511 346 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 GGT2P36268 569 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 SP140Q13342 867 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 PRPSAP1Q14558 356 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 FUT10Q6P4F1 479 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 THAP5Q7Z6K1 395 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 HIPK4Q8NE63 616 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 RPL3LQ92901 407 aaKnown RBP7.52□□□□□ -1.21
CNOT4-201ENST00000315544 GIMAP5Q96F15 307 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 LINGO1Q96FE5 620 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 SENP5Q96HI0 755 aaPredicted RBP7.52□□□□□ -1.21
CNOT4-201ENST00000315544 GBP5Q96PP8 586 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 EHD1Q9H4M9 534 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 ERVK-18Q9QC07 812 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 PLEKHB1Q9UF11 243 aaPredicted RBP7.52□□□□□ -1.21
CNOT4-201ENST00000315544 ZMYM5Q9UJ78 669 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 GABRR3A8MPY1 467 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 RNASET2O00584 256 aaKnown RBP7.52□□□□□ -1.21
CNOT4-201ENST00000315544 HBQ1P09105 142 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 GSTM1P09488 218 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 CNPP09543 421 aaKnown RBP7.52□□□□□ -1.21
CNOT4-201ENST00000315544 HLA-EP13747 358 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 JUPP14923 745 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 ATP6V1B1P15313 513 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 ITPKAP23677 461 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 CFPP27918 469 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 CSTF3Q12996 717 aaKnown RBP7.52□□□□□ -1.21
CNOT4-201ENST00000315544 PAN2Q504Q3 1202 aaKnown RBP7.52□□□□□ -1.21
CNOT4-201ENST00000315544 SAXO2Q658L1 398 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 GRAMD4Q6IC98 578 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 ARMCX6Q7L4S7 300 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 LRRC70Q7Z2Q7 622 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms