RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 CARS2Q9HA77 564 aaKnown RBP17.67■□□□□ 0.42
CCDC43-201ENST00000315286 FAM120CQ9NX05 1096 aaKnown RBP17.67■□□□□ 0.42
CCDC43-201ENST00000315286 TAC3Q9UHF0 121 aa17.67■□□□□ 0.42
CCDC43-201ENST00000315286 OAZ3Q9UMX2 235 aa17.67■□□□□ 0.42
CCDC43-201ENST00000315286 KCNK6Q9Y257 313 aa17.67■□□□□ 0.42
CCDC43-201ENST00000315286 FAM220BPB1ANY3 271 aa17.66■□□□□ 0.42
CCDC43-201ENST00000315286 ACOX3O15254 700 aa17.66■□□□□ 0.42
CCDC43-201ENST00000315286 SLC31A1O15431 190 aa17.66■□□□□ 0.42
CCDC43-201ENST00000315286 CPSF4O95639 269 aaKnown RBP17.66■□□□□ 0.42
CCDC43-201ENST00000315286 GBAP04062 536 aa17.66■□□□□ 0.42
CCDC43-201ENST00000315286 EFNA1P20827 205 aaPredicted RBP17.66■□□□□ 0.42
CCDC43-201ENST00000315286 CYP2A13Q16696 494 aa17.66■□□□□ 0.42
CCDC43-201ENST00000315286 TMIGD1Q6UXZ0 262 aa17.66■□□□□ 0.42
CCDC43-201ENST00000315286 COMMD6Q7Z4G1 85 aa17.66■□□□□ 0.42
CCDC43-201ENST00000315286 NECTIN4Q96NY8 510 aa17.66■□□□□ 0.42
CCDC43-201ENST00000315286 INSM2Q96T92 566 aaPredicted RBP17.66■□□□□ 0.42
CCDC43-201ENST00000315286 DUSP26Q9BV47 211 aa17.66■□□□□ 0.42
CCDC43-201ENST00000315286 FBRSQ9HAH7 460 aa17.66■□□□□ 0.42
CCDC43-201ENST00000315286 LIMD1Q9UGP4 676 aa17.66■□□□□ 0.42
CCDC43-201ENST00000315286 EXO1Q9UQ84 846 aaKnown RBP17.66■□□□□ 0.42
CCDC43-201ENST00000315286 SLC17A4Q9Y2C5 497 aa17.66■□□□□ 0.42
CCDC43-201ENST00000315286 PIAS3Q9Y6X2 628 aa17.66■□□□□ 0.42
CCDC43-201ENST00000315286 KLHL33A6NCF5 533 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 SCELO95171 688 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 LDLRP01130 860 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 IDSP22304 550 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 IER5LQ5T953 404 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 CPTPQ5TA50 214 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 ENPP6Q6UWR7 440 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 ZNF621Q6ZSS3 439 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 VN1R5Q7Z5H4 357 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 FAM124AQ86V42 546 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 WDR48Q8TAF3 677 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 FBXO30Q8TB52 745 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 STARD8Q92502 1023 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 SH3KBP1Q96B97 665 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 C12orf66Q96MD2 445 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 FERD3LQ96RJ6 166 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 APOOQ9BUR5 198 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 OSBPL11Q9BXB4 747 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 BTBD1Q9H0C5 482 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 SIRT5Q9NXA8 310 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 LMCD1Q9NZU5 365 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 MOSPD1Q9UJG1 213 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 LINGO3P0C6S8 592 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 RAP2AP10114 183 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 HSD17B2P37059 387 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 PIK3CBP42338 1070 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 PPP2CBP62714 309 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 PPP2CAP67775 309 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 ABHD18Q0P651 414 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 MLF2Q15773 248 aaPredicted RBP17.65■□□□□ 0.42
CCDC43-201ENST00000315286 FAM98BQ52LJ0 330 aaKnown RBP17.65■□□□□ 0.42
CCDC43-201ENST00000315286 ISLR2Q6UXK2 745 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 C17orf64Q86WR6 236 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 PACRGLQ8N7B6 248 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.65■□□□□ 0.424e-15■■■□□ 18.8
CCDC43-201ENST00000315286 UBE2E3Q969T4 207 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 FAM162AQ96A26 154 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 SIPA1Q96FS4 1042 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 TIMM29Q9BSF4 260 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 C9orf16Q9BUW7 83 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 C1QTNF7Q9BXJ2 289 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 PDP2Q9P2J9 529 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 SUFUQ9UMX1 484 aa17.65■□□□□ 0.42
CCDC43-201ENST00000315286 HEATR5BQ9P2D3 2071 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 CCDC85CA6NKD9 419 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 CLIC1O00299 241 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 CREG1O75629 220 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 KLHL18O94889 574 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 ENGP17813 658 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 PSMB5P28074 263 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 CHRNB3Q05901 458 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 RBBP5Q15291 538 aaKnown RBP17.64■□□□□ 0.41
CCDC43-201ENST00000315286 NKG7Q16617 165 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 NHSL2Q5HYW2 709 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 CAMKMTQ7Z624 323 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 SPRED1Q7Z699 444 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 OR52E4Q8NGH9 312 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 NETO1Q8TDF5 533 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 COQ8BQ96D53 544 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 REXO5Q96IC2 774 aaKnown RBP17.64■□□□□ 0.41
CCDC43-201ENST00000315286 CXorf56Q9H5V9 222 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 PREBQ9HCU5 417 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 CD93Q9NPY3 652 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 CUEDC1Q9NWM3 386 aaPredicted RBP17.64■□□□□ 0.41
CCDC43-201ENST00000315286 TSC22D4Q9Y3Q8 395 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 MYO10Q9HD67 2058 aa17.64■□□□□ 0.41
CCDC43-201ENST00000315286 RNF103-CHMP3A0A140T963 221 aa17.63■□□□□ 0.41
CCDC43-201ENST00000315286 A0A1W2PPV9 198 aa17.63■□□□□ 0.41
CCDC43-201ENST00000315286 EVPLLA8MZ36 301 aa17.63■□□□□ 0.41
CCDC43-201ENST00000315286 DLGAP1O14490 977 aa17.63■□□□□ 0.41
CCDC43-201ENST00000315286 SCAMP1O15126 338 aa17.63■□□□□ 0.41
CCDC43-201ENST00000315286 HPCAL1P37235 193 aa17.63■□□□□ 0.41
CCDC43-201ENST00000315286 ZNF763Q0D2J5 394 aa17.63■□□□□ 0.41
CCDC43-201ENST00000315286 MAP7Q14244 749 aa17.63■□□□□ 0.41
CCDC43-201ENST00000315286 TMTC4Q5T4D3 741 aa17.63■□□□□ 0.41
CCDC43-201ENST00000315286 CHERPQ8IWX8 916 aaKnown RBP17.63■□□□□ 0.41
CCDC43-201ENST00000315286 KRT78Q8N1N4 520 aa17.63■□□□□ 0.41
CCDC43-201ENST00000315286 METTL4Q8N3J2 472 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms