RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 SPANXN4Q5MJ08 99 aa11.61□□□□□ -0.55
AMBRA1-201ENST00000314845 SLC2A7Q6PXP3 512 aa11.61□□□□□ -0.55
AMBRA1-201ENST00000314845 QSOX2Q6ZRP7 698 aa11.61□□□□□ -0.55
AMBRA1-201ENST00000314845 MAPK15Q8TD08 544 aa11.61□□□□□ -0.55
AMBRA1-201ENST00000314845 SETD7Q8WTS6 366 aaKnown RBP11.61□□□□□ -0.55
AMBRA1-201ENST00000314845 KLHL6Q8WZ60 621 aa11.61□□□□□ -0.55
AMBRA1-201ENST00000314845 PIGKQ92643 395 aa11.61□□□□□ -0.55
AMBRA1-201ENST00000314845 ARMC5Q96C12 935 aa11.61□□□□□ -0.55
AMBRA1-201ENST00000314845 MGME1Q9BQP7 344 aa11.61□□□□□ -0.55
AMBRA1-201ENST00000314845 HRASLS2Q9NWW9 162 aa11.61□□□□□ -0.55
AMBRA1-201ENST00000314845 XRN1Q8IZH2 1706 aaKnown RBP11.61□□□□□ -0.55
AMBRA1-201ENST00000314845 FAM221BA6H8Z2 402 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 CAPN5O15484 640 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 VEGFDO43915 354 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 SNX4O95219 450 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 KAT7O95251 611 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 DBIP07108 87 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 HNF1BP35680 557 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 UFM1P61960 85 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 TSPAN5P62079 268 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 E2F2Q14209 437 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 PRRT3Q5FWE3 981 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 C17orf99Q6UX52 265 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 C15orf39Q6ZRI6 1047 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 RAB43Q86YS6 212 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 ZNF676Q8N7Q3 588 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 IGSF8Q969P0 613 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 PKP4Q99569 1192 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 ANKRA2Q9H9E1 313 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 COL2A1P02458 1487 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 C10orf71Q711Q0 1435 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 HEPACAM2A8MVW5 462 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 FAM72CH0Y354 149 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 MATN2O00339 956 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 GATBO75879 557 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 F7P08709 466 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 CKMT2P17540 419 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 LEPRP48357 1165 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 ARCN1P48444 511 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 PTPRCAPQ14761 206 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 UAP1L1Q3KQV9 507 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 PDCD4Q53EL6 469 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 ZNF678Q5SXM1 525 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 PDSS1Q5T2R2 415 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 FAM72AQ5TYM5 149 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 FAM72DQ6L9T8 149 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 SUSD1Q6UWL2 747 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 KCTD8Q6ZWB6 473 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 TRIM74Q86UV6 250 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 FAM72BQ86X60 149 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 KLHL36Q8N4N3 616 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 TSPEARQ8WU66 669 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 ZBTB26Q9HCK0 441 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 PCDHGB5Q9Y5G0 923 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 BEST1O76090 585 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 LINGO3P0C6S8 592 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 GGT5P36269 586 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 SMSP52788 366 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 PITX1P78337 314 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 PLGLB1Q02325 96 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 MXD1Q05195 221 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 RAB33AQ14088 237 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 RNASE12Q5GAN4 147 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 SLC39A5Q6ZMH5 540 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 GRHL3Q8TE85 626 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 BADQ92934 168 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 COQ8BQ96D53 544 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 TRIB3Q96RU7 358 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 YTHDF1Q9BYJ9 559 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 EBF2Q9HAK2 575 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 KLRF1Q9NZS2 232 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 SUSD2Q9UGT4 822 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 PSAT1Q9Y617 370 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 C2orf74A8MZ97 194 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 E7ENX8 843 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 PCDHGA12O60330 932 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 MPC1LP0DKB6 136 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 CYBAP13498 195 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 FPR1P21462 350 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 HOXA11P31270 313 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 BMPR1AP36894 532 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 STK19P49842 368 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 VBP1P61758 197 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 CBX3Q13185 183 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 RTP2Q5QGT7 225 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 PRPF38BQ5VTL8 546 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 LIPJQ5W064 366 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 C12orf76Q8N812 135 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 TNFAIP8L1Q8WVP5 186 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 PHF12Q96QT6 1004 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 OAZ3Q9UMX2 235 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 WDR45Q9Y484 360 aa11.6□□□□□ -0.55
AMBRA1-201ENST00000314845 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.59□□□□□ -0.55
AMBRA1-201ENST00000314845 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.59□□□□□ -0.55
AMBRA1-201ENST00000314845 ZNF99A8MXY4 864 aaPredicted RBP11.59□□□□□ -0.55
AMBRA1-201ENST00000314845 MTRF1O75570 445 aaKnown RBP11.59□□□□□ -0.55
AMBRA1-201ENST00000314845 AHSA1O95433 338 aa11.59□□□□□ -0.55
AMBRA1-201ENST00000314845 POLR2CP19387 275 aaPredicted RBP11.59□□□□□ -0.55
AMBRA1-201ENST00000314845 ETV3P41162 512 aa11.59□□□□□ -0.55
AMBRA1-201ENST00000314845 PCLAFQ15004 111 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms