RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 PRKD3O94806 890 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 HIST1H2ABP04908 130 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 IGFBP5P24593 272 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 CLDN2P57739 230 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 GRIK2Q13002 908 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 TNFAIP8L3Q5GJ75 292 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 CDKL4Q5MAI5 379 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 NXPE4Q6UWF7 544 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 HIST3H2AQ7L7L0 130 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 AMIGO1Q86WK6 493 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 TDHQ8IZJ6 230 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 FBXO15Q8NCQ5 510 aaPredicted RBP13.22□□□□□ -0.29
DDX54-202ENST00000314045 HIST1H2ACQ93077 130 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 ARRDC3Q96B67 414 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 RBM4BQ9BQ04 359 aaKnown RBP13.22□□□□□ -0.29
DDX54-202ENST00000314045 APOOQ9BUR5 198 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 RBM4Q9BWF3 364 aaKnown RBP13.22□□□□□ -0.29
DDX54-202ENST00000314045 OBP2AQ9NY56 170 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 ACTR3BQ9P1U1 418 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 IFT80Q9P2H3 777 aaPredicted RBP13.22□□□□□ -0.29
DDX54-202ENST00000314045 RP1L1Q8IWN7 2480 aaPredicted RBP13.21□□□□□ -0.29
DDX54-202ENST00000314045 FOCADQ5VW36 1801 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 A8MU76 341 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 RGS5O15539 181 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 ZNF217O75362 1048 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 MATN4O95460 622 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 MMP2P08253 660 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 RPS17P08708 135 aaKnown RBP13.21□□□□□ -0.29
DDX54-202ENST00000314045 THRBP10828 461 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 IMPDH2P12268 514 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 PGDP52209 483 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 CDH12P55289 794 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 CTSL3PQ5NE16 218 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 AFMIDQ63HM1 303 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 GALNT18Q6P9A2 607 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 KRTCAP2Q8N6L1 136 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 COX18Q8N8Q8 333 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 KCT2Q8NC54 265 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 OR5AR1Q8NGP9 310 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 HUS1BQ8NHY5 278 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 GPR151Q8TDV0 419 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 SLC7A6OSQ96CW6 309 aaPredicted RBP13.21□□□□□ -0.29
DDX54-202ENST00000314045 SPATA6Q9NWH7 488 aaPredicted RBP13.21□□□□□ -0.29
DDX54-202ENST00000314045 TTC3P53804 2025 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 ZNFX1Q9P2E3 1918 aaKnown RBP13.21□□□□□ -0.29
DDX54-202ENST00000314045 RGPD3A6NKT7 1758 aaPredicted RBP13.21□□□□□ -0.29
DDX54-202ENST00000314045 RGPD4Q7Z3J3 1758 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 ARHGEF33A8MVX0 844 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 HOXC11O43248 304 aaPredicted RBP13.21□□□□□ -0.29
DDX54-202ENST00000314045 PRMT3O60678 531 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 KCNJ13O60928 360 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 PRDX3P30048 256 aaKnown RBP13.21□□□□□ -0.29
DDX54-202ENST00000314045 MLLT3P42568 568 aaPredicted RBP13.21□□□□□ -0.29
DDX54-202ENST00000314045 TOMM20Q15388 145 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 C6orf52Q5T4I8 152 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 PNCKQ6P2M8 343 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 LILRA6Q6PI73 481 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 PHF21AQ96BD5 680 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 MRPL48Q96GC5 212 aaKnown RBP13.21□□□□□ -0.29
DDX54-202ENST00000314045 COL21A1Q96P44 957 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 SLC38A2Q96QD8 506 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 REEP4Q9H6H4 257 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 COQ10BQ9H8M1 238 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 RMI1Q9H9A7 625 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 CDC14AQ9UNH5 594 aa13.21□□□□□ -0.29
DDX54-202ENST00000314045 OR6C74A6NCV1 312 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 GLOD5A6NK44 160 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 PRLP01236 227 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 AOAHP28039 575 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 TIA1P31483 386 aaKnown RBP eCLIP13.21□□□□□ -0.3
DDX54-202ENST00000314045 KHKP50053 298 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 ST13P50502 369 aaKnown RBP13.21□□□□□ -0.3
DDX54-202ENST00000314045 DSTNP60981 165 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 CDK3Q00526 305 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 RHDQ02161 417 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 PTSQ03393 145 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 NANOGP8Q6NSW7 305 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 PARM1Q6UWI2 310 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 ADGRD2Q7Z7M1 963 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 OXR1Q8N573 874 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 ZNF540Q8NDQ6 660 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 AURKBQ96GD4 344 aaPredicted RBP13.21□□□□□ -0.3
DDX54-202ENST00000314045 F2RL3Q96RI0 385 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 GAL3ST4Q96RP7 486 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 RSPH9Q9H1X1 276 aaPredicted RBP13.21□□□□□ -0.3
DDX54-202ENST00000314045 NANOGQ9H9S0 305 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 CLN6Q9NWW5 311 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 PHF11Q9UIL8 331 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 PCDHGA2Q9Y5H1 932 aa13.21□□□□□ -0.3
DDX54-202ENST00000314045 DUXAA6NLW8 204 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 NPPAP01160 153 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 APOA1P02647 267 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 IL7RP16871 459 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 CR2P20023 1033 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 RPL4P36578 427 aaKnown RBP13.2□□□□□ -0.3
DDX54-202ENST00000314045 MAPK10P53779 464 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 CRISP3P54108 245 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 MTTPP55157 894 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 FOXA1P55317 472 aa13.2□□□□□ -0.3
DDX54-202ENST00000314045 ABATP80404 500 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms