RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 ADAMDEC1O15204 470 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 NSG1P42857 185 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 CLK3P49761 638 aaKnown RBP13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 GABARAPL2P60520 117 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 SLC14A2Q15849 920 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 HIST2H2AA3Q6FI13 130 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 XAGE5Q8WWM1 108 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 OMA1Q96E52 524 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 SMG9Q9H0W8 520 aaKnown RBP13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 GORASP2Q9H8Y8 452 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 THG1LQ9NWX6 298 aaKnown RBP13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 TBC1D14Q9P2M4 693 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 CRNNQ9UBG3 495 aaPredicted RBP13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 ERVK-11Q9UQG0 969 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 PIPSLA2A3N6 862 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 SLC10A3P09131 477 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 HSPB3Q12988 150 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 CTF1Q16619 201 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 DPY19L1Q2PZI1 675 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 SHQ1Q6PI26 577 aaKnown RBP13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 BBS7Q8IWZ6 715 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 GHDCQ8N2G8 530 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 C10orf111Q8N326 155 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 RAB8BQ92930 207 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 SLX1AQ9BQ83 275 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 ALOXE3Q9BYJ1 711 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 TMED5Q9Y3A6 229 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 ARNTLO00327 626 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 PCDHGA12O60330 932 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 IGLV3-25P01717 112 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 HTR1AP08908 422 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 MYL12AP19105 171 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 CBLBQ13191 982 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 EXOC3L2Q2M3D2 409 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 ATP13A5Q4VNC0 1218 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 ZNF517Q6ZMY9 492 aaPredicted RBP13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 MEX3DQ86XN8 651 aaKnown RBP13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 KRT73Q86Y46 540 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 GALNT12Q8IXK2 581 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 RIMKLAQ8IXN7 391 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 RHOXF1Q8NHV9 184 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 CLP1Q92989 425 aaKnown RBP13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 MGLLQ99685 303 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 TMEM246Q9BRR3 403 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 SLC35A5Q9BS91 424 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 TMEM121BQ9BXQ6 578 aaPredicted RBP13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 MMP27Q9H306 513 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 KCNE2Q9Y6J6 123 aa13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 KIAA0100Q14667 2235 aaKnown RBP13.86□□□□□ -0.19
CSNK1D-202ENST00000314028 GSAPA4D1B5 854 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 FAM227AF5H4B4 570 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 M0QZQ0 153 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 UPK1BO75841 260 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 C6orf47O95873 294 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 C1QCP02747 245 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 HOXC13P31276 330 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 BDKRB1P46663 353 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 SLC14A1Q13336 389 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 TBRG1Q3YBR2 411 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 IFI44LQ53G44 452 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 C10orf62Q5T681 223 aaPredicted RBP13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 PLET1Q6UQ28 207 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 GPR149Q86SP6 731 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 APCDD1Q8J025 514 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 NAGSQ8N159 534 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 PAPD5Q8NDF8 572 aaKnown RBP13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 YME1L1Q96TA2 773 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 TMEM245Q9H330 911 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 CFAP97Q9P2B7 532 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 SSR3Q9UNL2 185 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 MGAMO43451 1857 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 PRSS23O95084 383 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 ACPPP15309 386 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 BPIP17213 487 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 GABRR2P28476 465 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 SOX3P41225 446 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 TIAL1Q01085 375 aaKnown RBP eCLIP13.85□□□□□ -0.194e-11■■■■□ 21.7
CSNK1D-202ENST00000314028 SPATS1Q496A3 300 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 ERICH5Q6P6B1 374 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 USP30Q70CQ3 517 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 USP51Q70EK9 711 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 SERINC5Q86VE9 423 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 IPCEF1Q8WWN9 437 aaPredicted RBP13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 KAT2AQ92830 837 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 TP53INP1Q96A56 240 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 NECTIN4Q96NY8 510 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 MMP28Q9H239 520 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 KLHL1Q9NR64 748 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 TMEM98Q9Y2Y6 226 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 J3KTA2 159 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 PCDH7O60245 1069 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 IFNA14P01570 189 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 HMGCLP35914 325 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 CLDN8P56748 225 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 OLR1P78380 273 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 IFITM3Q01628 133 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 MVKQ03426 396 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 SRSF11Q05519 484 aaKnown RBP13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 PPIGQ13427 754 aaKnown RBP eCLIP13.85□□□□□ -0.195e-8■■□□□ 13.2
CSNK1D-202ENST00000314028 ZNF362Q5T0B9 420 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms