RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 CDKN2CP42773 168 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 TRPC1P48995 793 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 KRT33BQ14525 404 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 NFATC4Q14934 902 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 RBBP5Q15291 538 aaKnown RBP20.44■□□□□ 0.86
ATG4D-201ENST00000309469 DUOXA1Q1HG43 343 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 UAP1L1Q3KQV9 507 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 TMEM31Q5JXX7 168 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 ERMP1Q7Z2K6 904 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 VN1R5Q7Z5H4 357 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 ABHD11Q8NFV4 315 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 BMFQ96LC9 184 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 NSMCE2Q96MF7 247 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 OR2M4Q96R27 311 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 CPPED1Q9BRF8 314 aaPredicted RBP20.44■□□□□ 0.86
ATG4D-201ENST00000309469 UBE2ZQ9H832 354 aaPredicted RBP20.44■□□□□ 0.86
ATG4D-201ENST00000309469 PRDM8Q9NQV8 689 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 INVSQ9Y283 1065 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 SPTBN5Q9NRC6 3674 aaKnown RBP20.44■□□□□ 0.86
ATG4D-201ENST00000309469 SCN2BO60939 215 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 UQCRBP14927 111 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 HNRNPA2B1P22626 353 aaKnown RBP20.43■□□□□ 0.86
ATG4D-201ENST00000309469 CXCR2P25025 360 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 PTX3P26022 381 aaPredicted RBP20.43■□□□□ 0.86
ATG4D-201ENST00000309469 CCR8P51685 355 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 HKDC1Q2TB90 917 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 ENPP7Q6UWV6 458 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 COMMD6Q7Z4G1 85 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 AMIGO2Q86SJ2 522 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 TRPV3Q8NET8 790 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 TNIP2Q8NFZ5 429 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 MIEF2Q96C03 454 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 CCDC115Q96NT0 180 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 BTBD9Q96Q07 612 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 AIF1LQ9BQI0 150 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 MVB12BQ9H7P6 319 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 KAT8Q9H7Z6 458 aaKnown RBP20.43■□□□□ 0.86
ATG4D-201ENST00000309469 CUEDC1Q9NWM3 386 aaPredicted RBP20.43■□□□□ 0.86
ATG4D-201ENST00000309469 FAM120CQ9NX05 1096 aaKnown RBP20.43■□□□□ 0.86
ATG4D-201ENST00000309469 OR52A4PA6NMU1 304 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 GABRR3A8MPY1 467 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 H0Y8X5 98 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 SAP18O00422 153 aaKnown RBP20.43■□□□□ 0.86
ATG4D-201ENST00000309469 LAMP1P11279 417 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 PSMB5P28074 263 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 RAB28P51157 221 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 PHACTR4Q8IZ21 702 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 METTL4Q8N3J2 472 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 ZNF548Q8NEK5 533 aaPredicted RBP20.43■□□□□ 0.86
ATG4D-201ENST00000309469 HMGB4Q8WW32 186 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 OR1E3Q8WZA6 343 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 EME1Q96AY2 570 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 AURKBQ96GD4 344 aaPredicted RBP20.43■□□□□ 0.86
ATG4D-201ENST00000309469 RHBGQ9H310 441 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 ADGRE2Q9UHX3 823 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 ANAPC2Q9UJX6 822 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 CNOT11Q9UKZ1 510 aaKnown RBP20.43■□□□□ 0.86
ATG4D-201ENST00000309469 NDRG2Q9UN36 371 aaKnown RBP20.43■□□□□ 0.86
ATG4D-201ENST00000309469 BTBD3Q9Y2F9 522 aa20.43■□□□□ 0.86
ATG4D-201ENST00000309469 GMNNO75496 209 aa20.42■□□□□ 0.86
ATG4D-201ENST00000309469 APBB3O95704 486 aa20.42■□□□□ 0.86
ATG4D-201ENST00000309469 ANXA6P08133 673 aa20.42■□□□□ 0.86
ATG4D-201ENST00000309469 HPCAL1P37235 193 aa20.42■□□□□ 0.86
ATG4D-201ENST00000309469 TFF2Q03403 129 aa20.42■□□□□ 0.86
ATG4D-201ENST00000309469 RPE65Q16518 533 aa20.42■□□□□ 0.86
ATG4D-201ENST00000309469 MTX3Q5HYI7 312 aa20.42■□□□□ 0.86
ATG4D-201ENST00000309469 CPTPQ5TA50 214 aa20.42■□□□□ 0.86
ATG4D-201ENST00000309469 ANKRD26P1Q6NSI1 321 aa20.42■□□□□ 0.86
ATG4D-201ENST00000309469 GCNT7Q6ZNI0 430 aa20.42■□□□□ 0.86
ATG4D-201ENST00000309469 PAPD5Q8NDF8 572 aaKnown RBP20.42■□□□□ 0.86
ATG4D-201ENST00000309469 WDR48Q8TAF3 677 aa20.42■□□□□ 0.86
ATG4D-201ENST00000309469 GATA6Q92908 595 aa20.42■□□□□ 0.86
ATG4D-201ENST00000309469 WDR92Q96MX6 357 aa20.42■□□□□ 0.86
ATG4D-201ENST00000309469 PANX1Q96RD7 426 aa20.42■□□□□ 0.86
ATG4D-201ENST00000309469 GAS2L1Q99501 681 aaPredicted RBP20.42■□□□□ 0.86
ATG4D-201ENST00000309469 PRPF18Q99633 342 aaKnown RBP20.42■□□□□ 0.86
ATG4D-201ENST00000309469 DUSP26Q9BV47 211 aa20.42■□□□□ 0.86
ATG4D-201ENST00000309469 XKR8Q9H6D3 395 aa20.42■□□□□ 0.86
ATG4D-201ENST00000309469 EBF1Q9UH73 591 aa20.42■□□□□ 0.86
ATG4D-201ENST00000309469 NUMA1Q14980 2115 aa20.42■□□□□ 0.86
ATG4D-201ENST00000309469 ELOVL7A1L3X0 281 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 MAGEA13PA6NCF6 341 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 GSTA4O15217 222 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 PIM1P11309 404 aaPredicted RBP20.41■□□□□ 0.86
ATG4D-201ENST00000309469 BMP2P12643 396 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 PKLRP30613 574 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 ZNF763Q0D2J5 394 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 CAMKMTQ7Z624 323 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 CALHM3Q86XJ0 350 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 FLCNQ8NFG4 579 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 OR4K1Q8NGD4 311 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 OR2L8Q8NGY9 312 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.41■□□□□ 0.86
ATG4D-201ENST00000309469 COQ8BQ96D53 544 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 PDXPQ96GD0 296 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 TBCDQ9BTW9 1192 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 RAB11FIP5Q9BXF6 653 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 VCXQ9H320 206 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 GORASP2Q9H8Y8 452 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 SLC2A4RGQ9NR83 387 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms