RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 ASPDHA6ND91 283 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 B4DGG1 531 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 KIR2DS3K7RE56 304 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 NR5A2O00482 541 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 AIM2O14862 343 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 VIPP01282 170 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 SNRPB2P08579 225 aaKnown RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 BCKDHAP12694 445 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 HSD3B1P14060 373 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 TACR1P25103 407 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 HSD3B2P26439 372 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 SHMT2P34897 504 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 NUDT2P50583 147 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 CCR8P51685 355 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 AFF3P51826 1226 aaKnown RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 MNAT1P51948 309 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 CSNK1G2P78368 415 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 IRX1P78414 480 aaPredicted RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 ELF3P78545 371 aaPredicted RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 MXRA7P84157 204 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 BNC1Q01954 994 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 TBL3Q12788 808 aaKnown RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 GRIK2Q13002 908 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 MAD2L1Q13257 205 aaPredicted RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 LAPTM5Q13571 262 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 PTGR1Q14914 329 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 KIR2DS5Q14953 304 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 RPS6KA2Q15349 733 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 PAGE2BQ5JRK9 111 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 WDR45BQ5MNZ6 344 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 KIAA1614Q5VZ46 1190 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 REP15Q6BDI9 236 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 BLOC1S3Q6QNY0 202 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 RETREG3Q86VR2 466 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 ZNF761Q86XN6 746 aaPredicted RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 TRIM48Q8IWZ4 208 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 ZNF548Q8NEK5 533 aaPredicted RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 FAM46DQ8NEK8 389 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 OR2L3Q8NG85 312 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 LMX1AQ8TE12 382 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 NELL1Q92832 810 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 REPS1Q96D71 796 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 C11orf24Q96F05 449 aaPredicted RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 APOLD1Q96LR9 279 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 MRPL1Q9BYD6 325 aaKnown RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 SYNPO2LQ9H987 977 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 TMEM74BQ9NUR3 256 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 OR6C2Q9NZP2 312 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 ZIM2Q9NZV7 527 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 VPS29Q9UBQ0 182 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 BAIAP2L1Q9UHR4 511 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 KLHL20Q9Y2M5 609 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 TSC22D4Q9Y3Q8 395 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 EP300Q09472 2414 aaPredicted RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 A0A1B0GVT2 93 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 DCDC2BA2VCK2 349 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 OR5K4A6NMS3 321 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 ISM1B1AKI9 464 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 FOXE1O00358 373 aaPredicted RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 YY2O15391 372 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 HRO43593 1189 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 LCMT2O60294 686 aaKnown RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 KDM1AO60341 852 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 SDC3O75056 442 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 SLC22A3O75751 556 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 TGFB1P01137 390 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 EZRP15311 586 aaKnown RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 SDC1P18827 310 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 DHPSP49366 369 aaPredicted RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 MAZP56270 477 aaKnown RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 RAE1P78406 368 aaKnown RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 RCAN2Q14206 197 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 PLCL1Q15111 1095 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 RBBP5Q15291 538 aaKnown RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 ELOCQ15369 112 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 MAPRE2Q15555 327 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 HIST2H2ACQ16777 129 aaPredicted RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 VPS26BQ4G0F5 336 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 LYSMD4Q5XG99 296 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 HIST2H2AA3Q6FI13 130 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 TMIGD1Q6UXZ0 262 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 PLD3Q8IV08 490 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 DSELQ8IZU8 1212 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 KRT78Q8N1N4 520 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 KRTCAP2Q8N6L1 136 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 CLHC1Q8NHS4 586 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 CHTF18Q8WVB6 975 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 GAB3Q8WWW8 586 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 CLPTM1LQ96KA5 538 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 AIF1LQ9BQI0 150 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 SLC25A23Q9BV35 468 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 EBPLQ9BY08 206 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 SRMSQ9H3Y6 488 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 MRPS30Q9NP92 439 aaKnown RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 UCKL1Q9NWZ5 548 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 EIF3LQ9Y262 564 aaKnown RBP6.68□□□□□ -1.34
PTCD2-201ENST00000308077 MDC1Q14676 2089 aaKnown RBP6.67□□□□□ -1.34
PTCD2-201ENST00000308077 FAM234BA2RU67 622 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms