RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CYP2W1Q8TAV3 490 aa13.05□□□□□ -0.32
TRIM56-201ENST00000306085 TMEM209Q96SK2 561 aa13.05□□□□□ -0.32
TRIM56-201ENST00000306085 OR2B2Q9GZK3 357 aa13.05□□□□□ -0.32
TRIM56-201ENST00000306085 OR4K17Q8NGC6 315 aa13.05□□□□□ -0.32
TRIM56-201ENST00000306085 EPYCQ99645 322 aa13.05□□□□□ -0.32
TRIM56-201ENST00000306085 OAZ3Q9UMX2 235 aa13.05□□□□□ -0.32
TRIM56-201ENST00000306085 HES2Q9Y543 173 aa13.05□□□□□ -0.32
TRIM56-201ENST00000306085 SHROOM3Q8TF72 1996 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 OR8U9P0C7N5 309 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 HABP2Q14520 560 aaPredicted RBP13.04□□□□□ -0.32
TRIM56-201ENST00000306085 ARL13AQ5H913 290 aaPredicted RBP13.04□□□□□ -0.32
TRIM56-201ENST00000306085 RBM12BQ8IXT5 1001 aaKnown RBP13.04□□□□□ -0.32
TRIM56-201ENST00000306085 RRNAD1Q96FB5 475 aaKnown RBP13.04□□□□□ -0.32
TRIM56-201ENST00000306085 OR2M4Q96R27 311 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 GFOD1Q9NXC2 390 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 P2RX2Q9UBL9 471 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 hCG_1818297A0A087WSY0 165 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 CCR8P51685 355 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 ACAD8Q9UKU7 415 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 A0A1W2PQ67 120 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 NDUFS4O43181 175 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 RFPL1O75677 317 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 ACTL6BO94805 426 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 AP2A1O95782 977 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 RIDAP52758 137 aaKnown RBP13.04□□□□□ -0.32
TRIM56-201ENST00000306085 LGI4Q8N135 537 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 CRAMP1Q96RY5 1269 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 TFB2MQ9H5Q4 396 aaKnown RBP13.04□□□□□ -0.32
TRIM56-201ENST00000306085 ADAP2Q9NPF8 381 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 TIGARQ9NQ88 270 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 UBE2J1Q9Y385 318 aaPredicted RBP13.04□□□□□ -0.32
TRIM56-201ENST00000306085 AGPSO00116 658 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 CCL16O15467 120 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 USP29Q9HBJ7 922 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 PPP5CP53041 499 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 MLLT10P55197 1068 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 USP51Q70EK9 711 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 CMKLR1Q99788 373 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 CD320Q9NPF0 282 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 POU2F3Q9UKI9 436 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 ADGRL3Q9HAR2 1447 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 SOX14O95416 240 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 ERBB2P04626 1255 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 RAB3BP20337 219 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 CD72P21854 359 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 LTKP29376 864 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 PRKXP51817 358 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 NRLP54845 237 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 IL12RB2Q99665 862 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 SDHAF3Q9NRP4 125 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 DNAJB9Q9UBS3 223 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 GRIN3BO60391 1043 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 MRPL3P09001 348 aaKnown RBP13.04□□□□□ -0.32
TRIM56-201ENST00000306085 RPL7AP62424 266 aaKnown RBP13.04□□□□□ -0.32
TRIM56-201ENST00000306085 PSPHP78330 225 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 PHF19Q5T6S3 580 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 LINGO4Q6UY18 593 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 CHCHD4Q8N4Q1 142 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 C9orf43Q8TAL5 461 aaPredicted RBP13.04□□□□□ -0.32
TRIM56-201ENST00000306085 OSTF1Q92882 214 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 PDCD1LG2Q9BQ51 273 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 LRRC4CQ9HCJ2 640 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 DNAJC27Q9NZQ0 273 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 ABCA1O95477 2261 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 RGS9O75916 674 aaPredicted RBP13.04□□□□□ -0.32
TRIM56-201ENST00000306085 CD53P19397 219 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 ERVK-21P61565 698 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 SLC15A3Q8IY34 581 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 OR51D1Q8NGF3 324 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 LENG8Q96PV6 779 aaPredicted RBP13.04□□□□□ -0.32
TRIM56-201ENST00000306085 FLRT1Q9NZU1 646 aa13.04□□□□□ -0.32
TRIM56-201ENST00000306085 STATHP02808 62 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 CBLP22681 906 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 EVI2BP34910 448 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 IDH3AP50213 366 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 DTX3Q8N9I9 347 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 SAMD11Q96NU1 681 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 METTL7AQ9H8H3 244 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 UGGT1Q9NYU2 1555 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 TISP43B9A030 160 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 ARL6IP5O75915 188 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 MT-CO2P00403 227 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 RAC2P15153 192 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 C14orf28Q4W4Y0 310 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 LRFN5Q96NI6 719 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 DUSP26Q9BV47 211 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 C9J4A7 227 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 SLITRK5O94991 958 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 AKR1C2P52895 323 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 A0A0G2JN53 185 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 BMP8BP34820 402 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 KHDC1Q4VXA5 237 aaKnown RBP13.03□□□□□ -0.32
TRIM56-201ENST00000306085 BBS12Q6ZW61 710 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 SLC26A9Q7LBE3 791 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 BMP8AQ7Z5Y6 402 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 FCRL2Q96LA5 508 aaPredicted RBP13.03□□□□□ -0.32
TRIM56-201ENST00000306085 PHOX2BQ99453 314 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 LRRC19Q9H756 370 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 RNF6Q9Y252 685 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 BACE2Q9Y5Z0 518 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms