RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ZNF552Q9H707 407 aaPredicted RBP25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 CTNNAL1Q9UBT7 734 aa25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 OARD1Q9Y530 152 aa25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 TTLL8A6PVC2 850 aa25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 MAP2K7O14733 419 aa25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 PCDH17O14917 1159 aa25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 URI1O94763 535 aaPredicted RBP25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 SLC35G6P0C7Q6 338 aa25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 ACPPP15309 386 aa25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 GP5P40197 560 aa25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 BCL6P41182 706 aa25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 HNMTP50135 292 aa25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 MLLT10P55197 1068 aa25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 CSHL1Q14406 222 aa25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 JMJD6Q6NYC1 403 aaPredicted RBP25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 FRA10AC1Q70Z53 315 aa25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 MFSD9Q8NBP5 474 aa25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 OR4K1Q8NGD4 311 aa25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 ANKRD49Q8WVL7 239 aa25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 TM4SF19Q96DZ7 209 aa25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 RBBP8Q99708 897 aa25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 MTO1Q9Y2Z2 717 aaKnown RBP25.1■■□□□ 1.61
CDKN2A-201ENST00000304494 MDC1Q14676 2089 aaKnown RBP25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 ANKRD12Q6UB98 2062 aa25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 NUP210LQ5VU65 1888 aa25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 MASP2O00187 686 aa25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 NSA2O95478 260 aaKnown RBP25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 STATHP02808 62 aa25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 MAGEA4P43358 317 aa25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 EMP2P54851 167 aa25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 GPX6P59796 221 aa25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 USP10Q14694 798 aaKnown RBP25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 IGFBP7Q16270 282 aa25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 WHAMMP3Q1A5X7 153 aa25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 TMEM214Q6NUQ4 689 aaKnown RBP25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 ZDHHC24Q6UX98 284 aa25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 OR9A4Q8NGU2 314 aa25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 SLC13A3Q8WWT9 602 aa25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 SLC5A11Q8WWX8 675 aa25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 GPR22Q99680 433 aa25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 EGFL8Q99944 293 aa25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 SARGQ9BW04 601 aa25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 DERL2Q9GZP9 239 aa25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 MRPS2Q9Y399 296 aaKnown RBP25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 DYRK1BQ9Y463 629 aa25.09■■□□□ 1.61
CDKN2A-201ENST00000304494 TRBC2A0A5B9 178 aa25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 IDSB3KWA1 339 aa25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 FFAR3O14843 346 aa25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 GPR42O15529 346 aa25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 LCMT2O60294 686 aaKnown RBP25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 HPP00738 406 aa25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 HEXBP07686 556 aa25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 STMN1P16949 149 aa25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 CXCR2P25025 360 aa25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 STX2P32856 288 aa25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 TSNQ15631 228 aaKnown RBP25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 ATG9BQ674R7 924 aa25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 IGFL3Q6UXB1 125 aa25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 LAPTM4BQ86VI4 370 aa25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 THOC6Q86W42 341 aaKnown RBP25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 CTAGE3PQ8IX95 158 aa25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 RBMXL3Q8N7X1 1067 aaKnown RBP25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 NEIL2Q969S2 332 aa25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 PNPLA2Q96AD5 504 aa25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 MIB2Q96AX9 1013 aa25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 CAB39LQ9H9S4 337 aa25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 ANKHQ9HCJ1 492 aa25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 UBR5O95071 2799 aaPredicted RBP25.08■■□□□ 1.61
CDKN2A-201ENST00000304494 OR1F1O43749 312 aa25.07■■□□□ 1.6
CDKN2A-201ENST00000304494 SORBS2O94875 1100 aaKnown RBP25.07■■□□□ 1.6
CDKN2A-201ENST00000304494 TRADDQ15628 312 aa25.07■■□□□ 1.6
CDKN2A-201ENST00000304494 GRTP1Q5TC63 336 aa25.07■■□□□ 1.6
CDKN2A-201ENST00000304494 SLC6A19Q695T7 634 aa25.07■■□□□ 1.6
CDKN2A-201ENST00000304494 ATCAYQ86WG3 371 aa25.07■■□□□ 1.6
CDKN2A-201ENST00000304494 MACROD1Q9BQ69 325 aa25.07■■□□□ 1.6
CDKN2A-201ENST00000304494 MFRPQ9BY79 579 aa25.07■■□□□ 1.6
CDKN2A-201ENST00000304494 LRRC4CQ9HCJ2 640 aa25.07■■□□□ 1.6
CDKN2A-201ENST00000304494 SLAMF7Q9NQ25 335 aa25.07■■□□□ 1.6
CDKN2A-201ENST00000304494 PLAAQ9Y263 795 aa25.07■■□□□ 1.6
CDKN2A-201ENST00000304494 KCNE2Q9Y6J6 123 aa25.07■■□□□ 1.6
CDKN2A-201ENST00000304494 ALOX12BO75342 701 aa25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 SPRP35270 261 aaPredicted RBP25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 CD97P48960 835 aa25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 SLC7A5Q01650 507 aa25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 MEF2AQ02078 507 aaPredicted RBP25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 NAB1Q13506 487 aa25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 PWP1Q13610 501 aa25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 SYT16Q17RD7 645 aa25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 KBTBD12Q3ZCT8 623 aa25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 CATSPEREQ5SY80 951 aa25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 AGAP7PQ5VUJ5 663 aa25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 ZC3H7AQ8IWR0 971 aaKnown RBP25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 ZADH2Q8N4Q0 377 aa25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 EFCAB3Q8N7B9 438 aa25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 KCT2Q8NC54 265 aa25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 CPT1CQ8TCG5 803 aa25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 TSNARE1Q96NA8 513 aa25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 AGAP4Q96P64 663 aa25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 LRRC1Q9BTT6 524 aa25.06■■□□□ 1.6
CDKN2A-201ENST00000304494 LHPPQ9H008 270 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms