RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 EARS2Q5JPH6 523 aaKnown RBP10.11□□□□□ -0.79
CLIP1-201ENST00000302528 ARHGAP40Q5TG30 622 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 TSTD1Q8NFU3 115 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 OR5AK3PQ8NH89 298 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 TSNAXQ99598 290 aaKnown RBP10.11□□□□□ -0.79
CLIP1-201ENST00000302528 MYNNQ9NPC7 610 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 FZD1Q9UP38 647 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 SLC35F4A4IF30 521 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 EI24O14681 340 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 C8BP07358 591 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 PTPN2P17706 415 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 PBX3P40426 434 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 HNRNPKP61978 463 aaKnown RBP eCLIP10.11□□□□□ -0.791e-6■■■■□ 23.8
CLIP1-201ENST00000302528 DAG1Q14118 895 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 DCDC5Q6ZRR9 648 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 TMPPEQ6ZT21 453 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 GPR142Q7Z601 462 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 GALNT12Q8IXK2 581 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 GPC2Q8N158 579 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 CAMKVQ8NCB2 501 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 SMG8Q8ND04 991 aaKnown RBP10.11□□□□□ -0.79
CLIP1-201ENST00000302528 PHOSPHO1Q8TCT1 267 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 HMCESQ96FZ2 354 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 SLC25A44Q96H78 314 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-201ENST00000302528 PKP4Q99569 1192 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 NIFKQ9BYG3 293 aaKnown RBP10.11□□□□□ -0.79
CLIP1-201ENST00000302528 OR2S2Q9NQN1 319 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 FLRT1Q9NZU1 646 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 CNTN3Q9P232 1028 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 GTF2IRD1Q9UHL9 959 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 POU2F3Q9UKI9 436 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 HCN2Q9UL51 889 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 NDUFS4O43181 175 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 NPHS1O60500 1241 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 SYNGR4O95473 234 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 ACP5P13686 325 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 HTR2AP28223 471 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 CASP7P55210 303 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 CLRN1P58418 232 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 SLBPQ14493 270 aaKnown RBP eCLIP10.11□□□□□ -0.79
CLIP1-201ENST00000302528 CCDC58Q4VC31 144 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 ALPK1Q96QP1 1244 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 HINT2Q9BX68 163 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 LHX5Q9H2C1 402 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 PTGES2Q9H7Z7 377 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 TUBG2Q9NRH3 451 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 IL17RBQ9NRM6 502 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 PPP1R14DQ9NXH3 145 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 NUFIP1Q9UHK0 495 aaKnown RBP10.11□□□□□ -0.79
CLIP1-201ENST00000302528 PCDHB14Q9Y5E9 798 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 DNMT3AQ9Y6K1 912 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-201ENST00000302528 F5H0A9 414 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-201ENST00000302528 ERI3O43414 337 aaKnown RBP10.11□□□□□ -0.79
CLIP1-201ENST00000302528 BCHEP06276 602 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 GJB1P08034 283 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 CD72P21854 359 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 ACADVLP49748 655 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 IDH3AP50213 366 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 RTP1P59025 263 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 RAB15P59190 212 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 RAB5BP61020 215 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 FBXO43Q4G163 708 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 C6orf183Q5T699 404 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 EEF1DP3Q658K8 133 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 CATSPERGQ6ZRH7 1159 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 USP50Q70EL3 339 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-201ENST00000302528 TRMT10AQ8TBZ6 339 aaKnown RBP10.11□□□□□ -0.79
CLIP1-201ENST00000302528 NUS1Q96E22 293 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 SLC6A7Q99884 636 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 USB1Q9BQ65 265 aaKnown RBP10.11□□□□□ -0.79
CLIP1-201ENST00000302528 A8MU76 341 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 K7EPI3 171 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 TGFB1P01137 390 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 GKN3PP0CG01 181 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 CDH1P12830 882 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 MATN1P21941 496 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 PIK3CBP42338 1070 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 ZNF81P51508 661 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 GBE1Q04446 702 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 ARSHQ5FYA8 562 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 RALGPS1Q5JS13 557 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 LRIF1Q5T3J3 769 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 NATD1Q8N6N6 113 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 STON2Q8WXE9 905 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 IRGQQ8WZA9 623 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 NDRG1Q92597 394 aaKnown RBP10.1□□□□□ -0.79
CLIP1-201ENST00000302528 CREB3L1Q96BA8 519 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 RPL10LQ96L21 214 aaKnown RBP10.1□□□□□ -0.79
CLIP1-201ENST00000302528 CD180Q99467 661 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 LRRC3Q9BY71 257 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 EBF3Q9H4W6 596 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 RANBP3Q9H6Z4 567 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-201ENST00000302528 WDR26Q9H7D7 661 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 MEAF6Q9HAF1 191 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 PXDNQ92626 1479 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 RIC1Q4ADV7 1423 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 MATN3O15232 486 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 ACTL6BO94805 426 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 OPN1SWP03999 348 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 PRPS1L1P21108 318 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms