RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 MSANTD1Q6ZTZ1 278 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 COMMD6Q7Z4G1 85 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 GPR180Q86V85 440 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 OR4K1Q8NGD4 311 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 CDC26Q8NHZ8 85 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 WDR48Q8TAF3 677 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 TOE1Q96GM8 510 aaKnown RBP21.41■■□□□ 1.02
SMAD1-201ENST00000302085 PRAP1Q96NZ9 151 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 TRIM15Q9C019 465 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 RHBGQ9H310 441 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 DUSP12Q9UNI6 340 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 SNX13Q9Y5W8 968 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 CROCCQ5TZA2 2017 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 PCDH7O60245 1069 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 SCN2BO60939 215 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 KLHL18O94889 574 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 RGS19P49795 217 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 CCR5P51681 352 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 CYP4F3Q08477 520 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 FZD5Q13467 585 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 GAS6Q14393 721 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 OGFRL1Q5TC84 451 aaPredicted RBP21.41■■□□□ 1.02
SMAD1-201ENST00000302085 ICE2Q659A1 982 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 KIAA0895LQ68EN5 471 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 IZUMO2Q6UXV1 221 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 LPCAT2Q7L5N7 544 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 AIF1LQ9BQI0 150 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 REXO4Q9GZR2 422 aaKnown RBP21.41■■□□□ 1.02
SMAD1-201ENST00000302085 TMEM168Q9H0V1 697 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 BTBD3Q9Y2F9 522 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 PCDHB3Q9Y5E6 796 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 TBX6O95947 436 aaPredicted RBP21.4■■□□□ 1.02
SMAD1-201ENST00000302085 COX7A2P14406 83 aa21.4■■□□□ 1.02
SMAD1-201ENST00000302085 ATP6V1C1P21283 382 aa21.4■■□□□ 1.02
SMAD1-201ENST00000302085 PTX3P26022 381 aaPredicted RBP21.4■■□□□ 1.02
SMAD1-201ENST00000302085 CDKN2CP42773 168 aa21.4■■□□□ 1.02
SMAD1-201ENST00000302085 ASMTP46597 345 aa21.4■■□□□ 1.02
SMAD1-201ENST00000302085 SRP54P61011 504 aaKnown RBP21.4■■□□□ 1.02
SMAD1-201ENST00000302085 PHEXP78562 749 aa21.4■■□□□ 1.02
SMAD1-201ENST00000302085 REEP5Q00765 189 aa21.4■■□□□ 1.02
SMAD1-201ENST00000302085 DPY19L1Q2PZI1 675 aa21.4■■□□□ 1.02
SMAD1-201ENST00000302085 ALG11Q2TAA5 492 aa21.4■■□□□ 1.02
SMAD1-201ENST00000302085 HKDC1Q2TB90 917 aa21.4■■□□□ 1.02
SMAD1-201ENST00000302085 CMPK2Q5EBM0 449 aa21.4■■□□□ 1.02
SMAD1-201ENST00000302085 WASH2PQ6VEQ5 465 aa21.4■■□□□ 1.02
SMAD1-201ENST00000302085 METTL4Q8N3J2 472 aa21.4■■□□□ 1.02
SMAD1-201ENST00000302085 TMEM102Q8N9M5 508 aaPredicted RBP21.4■■□□□ 1.02
SMAD1-201ENST00000302085 ANKRD53Q8N9V6 530 aa21.4■■□□□ 1.02
SMAD1-201ENST00000302085 OR2A1Q8NGT9 310 aa21.4■■□□□ 1.02
SMAD1-201ENST00000302085 CANT1Q8WVQ1 401 aa21.4■■□□□ 1.02
SMAD1-201ENST00000302085 ZNF184Q99676 751 aaPredicted RBP21.4■■□□□ 1.02
SMAD1-201ENST00000302085 ECSITQ9BQ95 431 aa21.4■■□□□ 1.02
SMAD1-201ENST00000302085 THUMPD3Q9BV44 507 aaKnown RBP21.4■■□□□ 1.02
SMAD1-201ENST00000302085 KLHL4Q9C0H6 718 aa21.4■■□□□ 1.02
SMAD1-201ENST00000302085 GABRR3A8MPY1 467 aa21.39■■□□□ 1.02
SMAD1-201ENST00000302085 YY2O15391 372 aa21.39■■□□□ 1.02
SMAD1-201ENST00000302085 GSNP06396 782 aa21.39■■□□□ 1.02
SMAD1-201ENST00000302085 LAMP1P11279 417 aa21.39■■□□□ 1.02
SMAD1-201ENST00000302085 IL9P15248 144 aa21.39■■□□□ 1.02
SMAD1-201ENST00000302085 ACADSP16219 412 aa21.39■■□□□ 1.02
SMAD1-201ENST00000302085 HRH2P25021 359 aa21.39■■□□□ 1.02
SMAD1-201ENST00000302085 CXCR2P25025 360 aa21.39■■□□□ 1.02
SMAD1-201ENST00000302085 PRDX1Q06830 199 aaKnown RBP21.39■■□□□ 1.02
SMAD1-201ENST00000302085 ANKRD26P1Q6NSI1 321 aa21.39■■□□□ 1.02
SMAD1-201ENST00000302085 SYNPOQ8N3V7 929 aa21.39■■□□□ 1.02
SMAD1-201ENST00000302085 FRMD1Q8N878 549 aa21.39■■□□□ 1.02
SMAD1-201ENST00000302085 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.39■■□□□ 1.02
SMAD1-201ENST00000302085 FAM110BQ8TC76 370 aa21.39■■□□□ 1.02
SMAD1-201ENST00000302085 MIEF2Q96C03 454 aa21.39■■□□□ 1.02
SMAD1-201ENST00000302085 RAB11FIP5Q9BXF6 653 aa21.39■■□□□ 1.02
SMAD1-201ENST00000302085 CAAP1Q9H8G2 361 aa21.39■■□□□ 1.02
SMAD1-201ENST00000302085 EXO1Q9UQ84 846 aaKnown RBP21.39■■□□□ 1.02
SMAD1-201ENST00000302085 HEBP2Q9Y5Z4 205 aa21.39■■□□□ 1.02
SMAD1-201ENST00000302085 GNG14A0A1W2PPG7 69 aa21.39■■□□□ 1.01
SMAD1-201ENST00000302085 FEZF1A0PJY2 475 aa21.39■■□□□ 1.01
SMAD1-201ENST00000302085 PRAMEF26H0Y7S4 382 aa21.39■■□□□ 1.01
SMAD1-201ENST00000302085 SCAMP2O15127 329 aaKnown RBP21.39■■□□□ 1.01
SMAD1-201ENST00000302085 PRICKLE3O43900 615 aaPredicted RBP21.39■■□□□ 1.01
SMAD1-201ENST00000302085 RASGRP1O95267 797 aa21.39■■□□□ 1.01
SMAD1-201ENST00000302085 GBAP04062 536 aa21.39■■□□□ 1.01
SMAD1-201ENST00000302085 SFT2D3Q587I9 215 aa21.39■■□□□ 1.01
SMAD1-201ENST00000302085 Q7L0L9 218 aa21.39■■□□□ 1.01
SMAD1-201ENST00000302085 ABI3BPQ7Z7G0 1075 aa21.39■■□□□ 1.01
SMAD1-201ENST00000302085 OR13H1Q8NG92 308 aa21.39■■□□□ 1.01
SMAD1-201ENST00000302085 OR8J2Q8NGG1 315 aa21.39■■□□□ 1.01
SMAD1-201ENST00000302085 NT5DC2Q9H857 520 aa21.39■■□□□ 1.01
SMAD1-201ENST00000302085 CCM2LQ9NUG4 571 aaPredicted RBP21.39■■□□□ 1.01
SMAD1-201ENST00000302085 WSB2Q9NYS7 404 aaPredicted RBP21.39■■□□□ 1.01
SMAD1-201ENST00000302085 ERVK-11Q9UQG0 969 aa21.39■■□□□ 1.01
SMAD1-201ENST00000302085 PCDHB11Q9Y5F2 797 aa21.39■■□□□ 1.01
SMAD1-201ENST00000302085 IGKV1-8A0A0C4DH67 115 aa21.38■■□□□ 1.01
SMAD1-201ENST00000302085 TCRBV5S2A0A599 114 aa21.38■■□□□ 1.01
SMAD1-201ENST00000302085 PEX1O43933 1283 aa21.38■■□□□ 1.01
SMAD1-201ENST00000302085 PIM1P11309 404 aaPredicted RBP21.38■■□□□ 1.01
SMAD1-201ENST00000302085 HNRNPFP52597 415 aaKnown RBP21.38■■□□□ 1.01
SMAD1-201ENST00000302085 CSNK1G2P78368 415 aa21.38■■□□□ 1.01
SMAD1-201ENST00000302085 DUOXA1Q1HG43 343 aa21.38■■□□□ 1.01
SMAD1-201ENST00000302085 TMEM126BQ8IUX1 230 aa21.38■■□□□ 1.01
SMAD1-201ENST00000302085 GOLM1Q8NBJ4 401 aa21.38■■□□□ 1.01
SMAD1-201ENST00000302085 OR10A6Q8NH74 314 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms