RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 SLC22A18Q96BI1 424 aa20.16■□□□□ 0.82
LTBP3-201ENST00000301873 CITED4Q96RK1 184 aa20.16■□□□□ 0.82
LTBP3-201ENST00000301873 ANKRA2Q9H9E1 313 aa20.16■□□□□ 0.82
LTBP3-201ENST00000301873 MKS1Q9NXB0 559 aa20.16■□□□□ 0.82
LTBP3-201ENST00000301873 MYH13Q9UKX3 1938 aa20.16■□□□□ 0.82
LTBP3-201ENST00000301873 TSPAN6O43657 245 aa20.16■□□□□ 0.82
LTBP3-201ENST00000301873 PRAMEF12O95522 483 aa20.16■□□□□ 0.82
LTBP3-201ENST00000301873 CCL5P13501 91 aa20.16■□□□□ 0.82
LTBP3-201ENST00000301873 FPGSQ05932 587 aa20.16■□□□□ 0.82
LTBP3-201ENST00000301873 E2F2Q14209 437 aa20.16■□□□□ 0.82
LTBP3-201ENST00000301873 LDLRAD1Q5T700 205 aa20.16■□□□□ 0.82
LTBP3-201ENST00000301873 STEAP4Q687X5 459 aa20.16■□□□□ 0.82
LTBP3-201ENST00000301873 PRR23BQ6ZRT6 265 aa20.16■□□□□ 0.82
LTBP3-201ENST00000301873 C12orf43Q96C57 262 aaKnown RBP20.16■□□□□ 0.82
LTBP3-201ENST00000301873 RAB11FIP5Q9BXF6 653 aa20.16■□□□□ 0.82
LTBP3-201ENST00000301873 A0A075B6Q4 140 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 HSD17B2P37059 387 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 NANOGNBQ7Z5D8 188 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 SLC5A11Q8WWX8 675 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 RNF31Q96EP0 1072 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 CAMK1GQ96NX5 476 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 YTHDF1Q9BYJ9 559 aaKnown RBP20.15■□□□□ 0.82
LTBP3-201ENST00000301873 RBM7Q9Y580 266 aaKnown RBP20.15■□□□□ 0.82
LTBP3-201ENST00000301873 TLX2O43763 284 aaPredicted RBP20.15■□□□□ 0.82
LTBP3-201ENST00000301873 ZNF865P0CJ78 1059 aaPredicted RBP20.15■□□□□ 0.82
LTBP3-201ENST00000301873 ZNF12P17014 697 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 BTN3A2P78410 334 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 ZNF648Q5T619 568 aaPredicted RBP20.15■□□□□ 0.82
LTBP3-201ENST00000301873 AQP11Q8NBQ7 271 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 SORCS1Q8WY21 1168 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 UFD1Q92890 307 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 KCNN2Q9H2S1 579 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 SP140LQ9H930 580 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 XPNPEP2O43895 674 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 CAPN15O75808 1086 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 IFNA6P05013 189 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 OLFML2AQ68BL7 652 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 CHST4Q8NCG5 386 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 MCCC1Q96RQ3 725 aaPredicted RBP20.15■□□□□ 0.82
LTBP3-201ENST00000301873 CKLFQ9UBR5 152 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 ITGB1BP2Q9UKP3 347 aa20.15■□□□□ 0.82
LTBP3-201ENST00000301873 GRID2O43424 1007 aa20.14■□□□□ 0.82
LTBP3-201ENST00000301873 SOCS5O75159 536 aa20.14■□□□□ 0.82
LTBP3-201ENST00000301873 AFF1P51825 1210 aaKnown RBP20.14■□□□□ 0.82
LTBP3-201ENST00000301873 PDCD4Q53EL6 469 aaKnown RBP20.14■□□□□ 0.82
LTBP3-201ENST00000301873 PPP2R2DQ66LE6 453 aa20.14■□□□□ 0.82
LTBP3-201ENST00000301873 ANKHQ9HCJ1 492 aa20.14■□□□□ 0.82
LTBP3-201ENST00000301873 ZDHHC4Q9NPG8 344 aa20.14■□□□□ 0.82
LTBP3-201ENST00000301873 A8MUA0 341 aa20.14■□□□□ 0.81
LTBP3-201ENST00000301873 TLR4O00206 839 aa20.14■□□□□ 0.81
LTBP3-201ENST00000301873 SLC22A1O15245 554 aa20.14■□□□□ 0.81
LTBP3-201ENST00000301873 MAGEB3O15480 346 aa20.14■□□□□ 0.81
LTBP3-201ENST00000301873 BCKDHAP12694 445 aa20.14■□□□□ 0.81
LTBP3-201ENST00000301873 CD68P34810 354 aaPredicted RBP20.14■□□□□ 0.81
LTBP3-201ENST00000301873 SH3BP2P78314 561 aa20.14■□□□□ 0.81
LTBP3-201ENST00000301873 CEP68Q76N32 757 aa20.14■□□□□ 0.81
LTBP3-201ENST00000301873 OR9A1PQ8NGU1 263 aa20.14■□□□□ 0.81
LTBP3-201ENST00000301873 FBXO27Q8NI29 283 aa20.14■□□□□ 0.81
LTBP3-201ENST00000301873 PEX13Q92968 403 aa20.14■□□□□ 0.81
LTBP3-201ENST00000301873 ZNF641Q96N77 438 aaPredicted RBP20.14■□□□□ 0.81
LTBP3-201ENST00000301873 POPDC3Q9HBV1 291 aa20.14■□□□□ 0.81
LTBP3-201ENST00000301873 PTNP21246 168 aa20.14■□□□□ 0.81
LTBP3-201ENST00000301873 UBXN2BQ14CS0 331 aa20.14■□□□□ 0.81
LTBP3-201ENST00000301873 PTGES3Q15185 160 aaKnown RBP20.14■□□□□ 0.81
LTBP3-201ENST00000301873 CYBRD1Q53TN4 286 aa20.14■□□□□ 0.81
LTBP3-201ENST00000301873 ZUFSPQ96AP4 578 aa20.14■□□□□ 0.81
LTBP3-201ENST00000301873 POFUT2Q9Y2G5 429 aa20.14■□□□□ 0.81
LTBP3-201ENST00000301873 RPS3AP61247 264 aaKnown RBP20.13■□□□□ 0.81
LTBP3-201ENST00000301873 IDNKQ5T6J7 187 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 ISCA2Q86U28 154 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 ATCAYQ86WG3 371 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 ALPK1Q96QP1 1244 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 INMTO95050 263 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 ZNF182P17025 639 aaPredicted RBP20.13■□□□□ 0.81
LTBP3-201ENST00000301873 PIK3CBP42338 1070 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 NEK7Q8TDX7 302 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 DMRTB1Q96MA1 342 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 C17orf62Q9BQA9 187 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 CFL2Q9Y281 166 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 ACTL7AQ9Y615 435 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 A0A0U1RQS6 177 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 CSF2RAP15509 400 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 RAB25P57735 213 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 RNF130Q86XS8 419 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 GRHL3Q8TE85 626 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 KLHL6Q8WZ60 621 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 EFHD2Q96C19 240 aaPredicted RBP20.13■□□□□ 0.81
LTBP3-201ENST00000301873 C11orf49Q9H6J7 331 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 POLMQ9NP87 494 aaPredicted RBP20.13■□□□□ 0.81
LTBP3-201ENST00000301873 CLDND1Q9NY35 253 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 EDDM13A0A1B0GTR0 161 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 ACOX3O15254 700 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 BNC1Q01954 994 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 LCN1P1Q5VSP4 162 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 RTP4Q96DX8 246 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 XKR8Q9H6D3 395 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 ELOVL2Q9NXB9 296 aa20.13■□□□□ 0.81
LTBP3-201ENST00000301873 DNAJC25-GNG10A0A024R161 153 aa20.12■□□□□ 0.81
LTBP3-201ENST00000301873 WWP2O00308 870 aa20.12■□□□□ 0.81
LTBP3-201ENST00000301873 CHRM1P11229 460 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms