RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 SLC22A4Q9H015 551 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 EXOSC4Q9NPD3 245 aaKnown RBP10.52□□□□□ -0.72
ZNF558-201ENST00000301475 KCNN3Q9UGI6 736 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 ARIH1Q9Y4X5 557 aaPredicted RBP10.52□□□□□ -0.72
ZNF558-201ENST00000301475 PIKFYVEQ9Y2I7 2098 aa10.52□□□□□ -0.72
ZNF558-201ENST00000301475 IGLV3-10A0A075B6K4 115 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 CCL15-CCL14A0A0B4J2E2 113 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 SMIM35A0A1B0GVV1 85 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 CCDC182A6NF36 153 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 TMEM229AB2RXF0 380 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 CLIC1O00299 241 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 ALPPP05187 535 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 CCNYL3P0C7X3 344 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 CD9P21926 228 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 BRCC3P46736 316 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 TTPAP49638 278 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 GZMKP49863 264 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 KCNJ10P78508 379 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 TARDBPQ13148 414 aaKnown RBP eCLIP10.52□□□□□ -0.73
ZNF558-201ENST00000301475 MADCAM1Q13477 382 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 ASAH1Q13510 395 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 CCL15Q16663 113 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 TOR1AIP1Q5JTV8 583 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 DPY19L3Q6ZPD9 716 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 RASAL3Q86YV0 1011 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 EFHBQ8N7U6 833 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 OPALINQ96PE5 141 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 NIPSNAP1Q9BPW8 284 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 APOL5Q9BWW9 433 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 MAT2BQ9NZL9 334 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 SATB2Q9UPW6 733 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 NT5C1B-RDH14C9J2C7 533 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 PLK4O00444 970 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 PRAMEF11O60813 436 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 MYCP01106 439 aaPredicted RBP10.52□□□□□ -0.73
ZNF558-201ENST00000301475 PRLP01236 227 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 CSF3P09919 207 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 NUDT7P0C024 238 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 ENGP17813 658 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 SDC1P18827 310 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 AQP1P29972 269 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 UQCRC1P31930 480 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 SOX3P41225 446 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 KIR2DL3P43628 341 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 EIF4HQ15056 248 aaKnown RBP10.52□□□□□ -0.73
ZNF558-201ENST00000301475 TAF1AQ15573 450 aaPredicted RBP10.52□□□□□ -0.73
ZNF558-201ENST00000301475 TIMM50Q3ZCQ8 353 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 SDHAF4Q5VUM1 108 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 LRRC66Q68CR7 880 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 NADSYN1Q6IA69 706 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 OVOS1Q6IE37 1185 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 MBOAT1Q6ZNC8 495 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 TCTE3Q8IZS6 198 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 CARNMT1Q8N4J0 409 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 ZNF557Q8N988 423 aaPredicted RBP10.52□□□□□ -0.73
ZNF558-201ENST00000301475 USP7Q93009 1102 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 CRELD1Q96HD1 420 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 UCK2Q9BZX2 261 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 PDFQ9HBH1 243 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 HHATLQ9HCP6 504 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 NMRK2Q9NPI5 230 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 SNX7Q9UNH6 387 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 TLR6Q9Y2C9 796 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 SPEF1Q9Y4P9 236 aa10.52□□□□□ -0.73
ZNF558-201ENST00000301475 MBLAC1A4D2B0 266 aaPredicted RBP10.51□□□□□ -0.73
ZNF558-201ENST00000301475 RRN3P2A6NIE6 340 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 GLUD1P00367 558 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 CYP2A6P11509 494 aaPredicted RBP10.51□□□□□ -0.73
ZNF558-201ENST00000301475 TNFRSF1BP20333 461 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 ERP29P30040 261 aaKnown RBP10.51□□□□□ -0.73
ZNF558-201ENST00000301475 PRIM2P49643 509 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 KCNQ1P51787 676 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 ZXDBP98169 803 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 GLYR1Q49A26 553 aaPredicted RBP10.51□□□□□ -0.73
ZNF558-201ENST00000301475 GPR155Q7Z3F1 870 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 GLCCI1Q86VQ1 547 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 LSMEM1Q8N8F7 131 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 NLGN4YQ8NFZ3 816 aaPredicted RBP10.51□□□□□ -0.73
ZNF558-201ENST00000301475 LKAAEAR1Q8TD35 194 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 DEDD2Q8WXF8 326 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 FRMD6Q96NE9 622 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 EGFL8Q99944 293 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 ACBD6Q9BR61 282 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 TTLL2Q9BWV7 592 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 ABHD16BQ9H3Z7 469 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 RNF121Q9H920 327 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 SNTG1Q9NSN8 517 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.51□□□□□ -0.73
ZNF558-201ENST00000301475 GREB1Q4ZG55 1949 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 CHD5Q8TDI0 1954 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 B8ZZF3 427 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 TREHO43280 583 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 NUDT1P36639 197 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 TBX4P57082 545 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 SCN1BQ07699 218 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 CSTF3Q12996 717 aaKnown RBP10.51□□□□□ -0.73
ZNF558-201ENST00000301475 PPIGQ13427 754 aaKnown RBP eCLIP10.51□□□□□ -0.735e-8■■■■■ 31.2
ZNF558-201ENST00000301475 DMC1Q14565 340 aa10.51□□□□□ -0.73
ZNF558-201ENST00000301475 CPSF6Q16630 551 aaKnown RBP eCLIP10.51□□□□□ -0.73
ZNF558-201ENST00000301475 BTBD16Q32M84 506 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms