RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 RBCK1Q9BYM8 510 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 CHIAQ9BZP6 476 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 NDRG4Q9ULP0 352 aaKnown RBP13.96□□□□□ -0.17
CDT1-201ENST00000301019 AAR2Q9Y312 384 aaKnown RBP13.96□□□□□ -0.17
CDT1-201ENST00000301019 U3KQ87 197 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 POLR2AP24928 1970 aaKnown RBP13.96□□□□□ -0.17
CDT1-201ENST00000301019 OR5K3A6NET4 321 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 UGT2B10P36537 528 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 CLCN5P51795 746 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 HMGCS2P54868 508 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 BACE1P56817 501 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 SNX16P57768 344 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 TEKQ02763 1124 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 EIF2B5Q13144 721 aaKnown RBP13.96□□□□□ -0.17
CDT1-201ENST00000301019 SF1Q15637 639 aaKnown RBP13.96□□□□□ -0.17
CDT1-201ENST00000301019 SSX1Q16384 188 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 MPPE1Q53F39 396 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 TSPYL5Q86VY4 417 aaPredicted RBP13.96□□□□□ -0.17
CDT1-201ENST00000301019 STK40Q8N2I9 435 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 SIDT2Q8NBJ9 832 aaKnown RBP13.96□□□□□ -0.17
CDT1-201ENST00000301019 MYDGFQ969H8 173 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 HDHD2Q9H0R4 259 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 C11orf16Q9NQ32 467 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 CLCA1A8K7I4 914 aa13.96□□□□□ -0.18
CDT1-201ENST00000301019 HAS3O00219 553 aa13.96□□□□□ -0.18
CDT1-201ENST00000301019 MYL12BO14950 172 aa13.96□□□□□ -0.18
CDT1-201ENST00000301019 MRPS14O60783 128 aaKnown RBP13.96□□□□□ -0.18
CDT1-201ENST00000301019 SOX14O95416 240 aa13.96□□□□□ -0.18
CDT1-201ENST00000301019 MYL12AP19105 171 aa13.96□□□□□ -0.18
CDT1-201ENST00000301019 EXOSC2Q13868 293 aaKnown RBP13.96□□□□□ -0.18
CDT1-201ENST00000301019 GANABQ14697 944 aaKnown RBP13.96□□□□□ -0.18
CDT1-201ENST00000301019 ZSWIM7Q19AV6 140 aa13.96□□□□□ -0.18
CDT1-201ENST00000301019 SHQ1Q6PI26 577 aaKnown RBP13.96□□□□□ -0.18
CDT1-201ENST00000301019 Q8N402 240 aa13.96□□□□□ -0.18
CDT1-201ENST00000301019 ZBED6CLQ96FA7 236 aaPredicted RBP13.96□□□□□ -0.18
CDT1-201ENST00000301019 PPM1BO75688 479 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 C1QBP02746 253 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 CDK1P06493 297 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 NUDT7P0C024 238 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 ARSBP15848 533 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 MAP2K3P46734 347 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 PER3P56645 1201 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 ZNF484Q5JVG2 852 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 KDM4DQ6B0I6 523 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 FAM171BQ6P995 826 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 RASSF6Q6ZTQ3 369 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 CREB3L2Q70SY1 520 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 KRT74Q7RTS7 529 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 DNAJC22Q8N4W6 341 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 LINC00469Q8N7U9 141 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 BOLLQ8N9W6 283 aaKnown RBP13.95□□□□□ -0.18
CDT1-201ENST00000301019 LPCAT1Q8NF37 534 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 SMG7Q92540 1137 aaKnown RBP13.95□□□□□ -0.18
CDT1-201ENST00000301019 NELL1Q92832 810 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 DCLRE1CQ96SD1 692 aaKnown RBP13.95□□□□□ -0.18
CDT1-201ENST00000301019 SLC39A8Q9C0K1 460 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 DNAJC27Q9NZQ0 273 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 PSORS1C1Q9UIG5 152 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 TRHDEQ9UKU6 1024 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 CMAHPQ9Y471 501 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 AKAP8O43823 692 aaKnown RBP13.95□□□□□ -0.18
CDT1-201ENST00000301019 NIPSNAP2O75323 286 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 MAFO75444 373 aaPredicted RBP13.95□□□□□ -0.18
CDT1-201ENST00000301019 SLC35F1Q5T1Q4 408 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 SPATA19Q7Z5L4 167 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 KIF18BQ86Y91 864 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 C9orf62Q8N4C0 152 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 RNF175Q8N4F7 328 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 ZNF566Q969W8 418 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 REPS1Q96D71 796 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 HSH2DQ96JZ2 352 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 NIPSNAP1Q9BPW8 284 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 PRKD2Q9BZL6 878 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 BPIFA1Q9NP55 256 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 TREX1Q9NSU2 369 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 NKIRAS2Q9NYR9 191 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 NEUROG3Q9Y4Z2 214 aa13.95□□□□□ -0.18
CDT1-201ENST00000301019 DOCK1Q14185 1865 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 TMEM88BA6NKF7 163 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 GLUD1P00367 558 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 IGFBP1P08833 259 aaPredicted RBP13.94□□□□□ -0.18
CDT1-201ENST00000301019 SLC2A3P11169 496 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 CD72P21854 359 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 GPR85P60893 370 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 NDUFAF5Q5TEU4 345 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 ZNF621Q6ZSS3 439 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 SLC5A8Q8N695 610 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 ASZ1Q8WWH4 475 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 SLC9A6Q92581 669 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 ZNF599Q96NL3 588 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 GPBP1L1Q9HC44 474 aaPredicted RBP13.94□□□□□ -0.18
CDT1-201ENST00000301019 C1orf109Q9NX04 203 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 GPRC5BQ9NZH0 403 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 DIMT1Q9UNQ2 313 aaKnown RBP13.94□□□□□ -0.18
CDT1-201ENST00000301019 MN1Q10571 1320 aaPredicted RBP13.94□□□□□ -0.18
CDT1-201ENST00000301019 CHURC1-FNTBB4DL54 471 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 KDM4BO94953 1096 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 FABP3P05413 133 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 FGF4P08620 206 aa13.94□□□□□ -0.18
CDT1-201ENST00000301019 HOXD4P09016 255 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms