RNA–Protein interactions for RNA: ENST00000299240.10

TTC17-202, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 1 (best) BASIC

Gene TTC17, Length 3,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-202ENST00000299240 FBXL6Q8N531 539 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 LINC01555Q8NAE3 123 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 TP53I13Q8NBR0 393 aaPredicted RBP12.13□□□□□ -0.47
TTC17-202ENST00000299240 LMX1AQ8TE12 382 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 CAMK1GQ96NX5 476 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 PHOX2BQ99453 314 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 OR52A5Q9H2C5 316 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 SMOXQ9NWM0 555 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 UTS2RQ9UKP6 389 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 PSMD11O00231 422 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 ERI3O43414 337 aaKnown RBP12.13□□□□□ -0.47
TTC17-202ENST00000299240 VEGFDO43915 354 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 NUDT7P0C024 238 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 KELP23276 732 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 TNFRSF4P43489 277 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 PHC1P78364 1004 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 EMX2Q04743 252 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 HYAL2Q12891 473 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 PIGGQ5H8A4 983 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 IRGCQ6NXR0 463 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 COMMD6Q7Z4G1 85 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 OR8K5Q8NH50 307 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 CLIP3Q96DZ5 547 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 VPS35Q96QK1 796 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 NUSAP1Q9BXS6 441 aaKnown RBP12.13□□□□□ -0.47
TTC17-202ENST00000299240 CTPS2Q9NRF8 586 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 KLF15Q9UIH9 416 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 PADI4Q9UM07 663 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 PCDHGB4Q9UN71 923 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 PCDHGA11Q9Y5H2 935 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 ALPK2Q86TB3 2170 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 WFS1O76024 890 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 KCNH1O95259 989 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 MPC1LP0DKB6 136 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 JUPP14923 745 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 TCF3P15923 654 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 HNRNPA2B1P22626 353 aaKnown RBP12.13□□□□□ -0.47
TTC17-202ENST00000299240 GPC1P35052 558 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 SEPHS1P49903 392 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 MAZP56270 477 aaKnown RBP12.13□□□□□ -0.47
TTC17-202ENST00000299240 TP53BP2Q13625 1128 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 TRIM25Q14258 630 aaKnown RBP12.13□□□□□ -0.47
TTC17-202ENST00000299240 SAMD4BQ5PRF9 694 aaKnown RBP12.13□□□□□ -0.47
TTC17-202ENST00000299240 TNFAIP8L2Q6P589 184 aaPredicted RBP12.13□□□□□ -0.47
TTC17-202ENST00000299240 SPATA19Q7Z5L4 167 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 PDZD3Q86UT5 571 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 TICAM1Q8IUC6 712 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 FBXL8Q96CD0 374 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 ZNF514Q96K75 400 aaPredicted RBP12.13□□□□□ -0.47
TTC17-202ENST00000299240 PPT2Q9UMR5 302 aa12.13□□□□□ -0.47
TTC17-202ENST00000299240 TSPAN11A1L157 253 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 LILRB5O75023 590 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 EEDO75530 441 aaKnown RBP12.12□□□□□ -0.47
TTC17-202ENST00000299240 C1GALT1C1LP0DN25 315 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 JUNDP17535 347 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 AKT2P31751 481 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 GALNT1Q10472 559 aaPredicted RBP12.12□□□□□ -0.47
TTC17-202ENST00000299240 SPIDRQ14159 915 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 TMEM259Q4ZIN3 620 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 GLYATQ6IB77 296 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 TMEM214Q6NUQ4 689 aaKnown RBP12.12□□□□□ -0.47
TTC17-202ENST00000299240 CHSY3Q70JA7 882 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.12□□□□□ -0.47
TTC17-202ENST00000299240 Q8N9G6 341 aaPredicted RBP12.12□□□□□ -0.47
TTC17-202ENST00000299240 KCT2Q8NC54 265 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 ADCY4Q8NFM4 1077 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 RNF217Q8TC41 542 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 N4BP2L2Q92802 583 aaPredicted RBP12.12□□□□□ -0.47
TTC17-202ENST00000299240 WDR92Q96MX6 357 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 CGREF1Q99674 301 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 C1QTNF2Q9BXJ5 285 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 MRPS30Q9NP92 439 aaKnown RBP12.12□□□□□ -0.47
TTC17-202ENST00000299240 C15orf41Q9Y2V0 281 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 RP1P56715 2156 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 PI15O43692 258 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 E2F6O75461 281 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 IL3P08700 152 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 AMD1P17707 334 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 VHLP40337 213 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 SLC6A12P48065 614 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 SRP54P61011 504 aaKnown RBP12.12□□□□□ -0.47
TTC17-202ENST00000299240 PYCR3Q53H96 274 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 XKR7Q5GH72 579 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 TJAP1Q5JTD0 557 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 SLCO4C1Q6ZQN7 724 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 ZNF551Q7Z340 670 aaPredicted RBP12.12□□□□□ -0.47
TTC17-202ENST00000299240 OR2I1PQ8NGU4 316 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 KLHL31Q9H511 634 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 AP4S1Q9Y587 144 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 PCDHB14Q9Y5E9 798 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 PLRG1O43660 514 aaKnown RBP12.12□□□□□ -0.47
TTC17-202ENST00000299240 ZNF23P17027 643 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 FEN1P39748 380 aaKnown RBP12.12□□□□□ -0.47
TTC17-202ENST00000299240 GSTA3Q16772 222 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 SFT2D3Q587I9 215 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 C6orf52Q5T4I8 152 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 CPTPQ5TA50 214 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 METRNLQ641Q3 311 aa12.12□□□□□ -0.47
TTC17-202ENST00000299240 ZC3H7AQ8IWR0 971 aaKnown RBP12.12□□□□□ -0.47
TTC17-202ENST00000299240 FAM86B1Q8N7N1 296 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms