RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 SNX31Q8N9S9 440 aa25.66■■□□□ 1.7
SSU72-201ENST00000291386 HNRNPLLQ8WVV9 542 aaKnown RBP25.66■■□□□ 1.7
SSU72-201ENST00000291386 MR1Q95460 341 aa25.66■■□□□ 1.7
SSU72-201ENST00000291386 NLNQ9BYT8 704 aa25.66■■□□□ 1.7
SSU72-201ENST00000291386 GEMIN8Q9NWZ8 242 aaKnown RBP25.66■■□□□ 1.7
SSU72-201ENST00000291386 DHCR7Q9UBM7 475 aaKnown RBP25.66■■□□□ 1.7
SSU72-201ENST00000291386 CROTQ9UKG9 612 aa25.66■■□□□ 1.7
SSU72-201ENST00000291386 RUVBL1Q9Y265 456 aaKnown RBP25.66■■□□□ 1.7
SSU72-201ENST00000291386 PCDHGA6Q9Y5G7 932 aa25.66■■□□□ 1.7
SSU72-201ENST00000291386 A0A1B0GX78 115 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 PRAMEF4O60810 478 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 H2AFYO75367 372 aaKnown RBP25.65■■□□□ 1.7
SSU72-201ENST00000291386 RAB40ALP0C0E4 278 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 LIFP15018 202 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 EPB42P16452 691 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 AGXTP21549 392 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 VARSP26640 1264 aaKnown RBP25.65■■□□□ 1.7
SSU72-201ENST00000291386 CRHR1P34998 444 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 CCT5P48643 541 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 TMPRSS3P57727 454 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 SRSF6Q13247 344 aaKnown RBP25.65■■□□□ 1.7
SSU72-201ENST00000291386 MUM1Q2TAK8 710 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 HKDC1Q2TB90 917 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 BEND6Q5SZJ8 279 aaPredicted RBP25.65■■□□□ 1.7
SSU72-201ENST00000291386 PRAMEF9Q5VWM5 478 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 FAM199XQ6PEV8 388 aaPredicted RBP25.65■■□□□ 1.7
SSU72-201ENST00000291386 TTLL10Q6ZVT0 673 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 ASPGQ86U10 573 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 TRABD2AQ86V40 505 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 CAMKVQ8NCB2 501 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 ZNF740Q8NDX6 193 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 CT55Q8WUE5 264 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 PTCD3Q96EY7 689 aaKnown RBP25.65■■□□□ 1.7
SSU72-201ENST00000291386 C10orf90Q96M02 699 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 GPR87Q9BY21 358 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 CHST8Q9H2A9 424 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 GPN2Q9H9Y4 310 aaPredicted RBP25.65■■□□□ 1.7
SSU72-201ENST00000291386 ZFP69BQ9UJL9 534 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 CELSR3Q9NYQ7 3312 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 EPG5Q9HCE0 2579 aa25.65■■□□□ 1.7
SSU72-201ENST00000291386 P2RX6O15547 441 aa25.64■■□□□ 1.7
SSU72-201ENST00000291386 OR1F1O43749 312 aa25.64■■□□□ 1.7
SSU72-201ENST00000291386 KRT4P19013 534 aa25.64■■□□□ 1.7
SSU72-201ENST00000291386 TCN2P20062 427 aa25.64■■□□□ 1.7
SSU72-201ENST00000291386 DLSTP36957 453 aa25.64■■□□□ 1.7
SSU72-201ENST00000291386 DCDP81605 110 aaKnown RBP25.64■■□□□ 1.7
SSU72-201ENST00000291386 NFKB2Q00653 900 aa25.64■■□□□ 1.7
SSU72-201ENST00000291386 ZNF844Q08AG5 666 aa25.64■■□□□ 1.7
SSU72-201ENST00000291386 LCN10Q6JVE6 187 aa25.64■■□□□ 1.7
SSU72-201ENST00000291386 CCDC81Q6ZN84 652 aa25.64■■□□□ 1.7
SSU72-201ENST00000291386 SNRNP27Q8WVK2 155 aaKnown RBP25.64■■□□□ 1.7
SSU72-201ENST00000291386 MVB12AQ96EY5 273 aa25.64■■□□□ 1.7
SSU72-201ENST00000291386 SEC16BQ96JE7 1060 aa25.64■■□□□ 1.7
SSU72-201ENST00000291386 SLC45A3Q96JT2 553 aa25.64■■□□□ 1.7
SSU72-201ENST00000291386 C17orf62Q9BQA9 187 aa25.64■■□□□ 1.7
SSU72-201ENST00000291386 EFCAB11Q9BUY7 163 aa25.64■■□□□ 1.7
SSU72-201ENST00000291386 C1QTNF3Q9BXJ4 246 aa25.64■■□□□ 1.7
SSU72-201ENST00000291386 MKS1Q9NXB0 559 aa25.64■■□□□ 1.7
SSU72-201ENST00000291386 KCND3Q9UK17 655 aa25.64■■□□□ 1.7
SSU72-201ENST00000291386 GRID1Q9ULK0 1009 aa25.64■■□□□ 1.7
SSU72-201ENST00000291386 E2F3O00716 465 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 WFS1O76024 890 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 CAPN1P07384 714 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 TAC1P20366 129 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 ALAS2P22557 587 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 GSTM2P28161 218 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 PIK3CGP48736 1102 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 LAPTM5Q13571 262 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 DNASE1L3Q13609 305 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 PWP1Q13610 501 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 FAM53BQ14153 422 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 PRMT9Q6P2P2 845 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 C16orf46Q6P387 395 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 FAM198BQ6UWH4 519 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 KRT78Q8N1N4 520 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 TEX9Q8N6V9 391 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 SLC13A3Q8WWT9 602 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 PHF21BQ96EK2 531 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 EMCNQ9ULC0 261 aa25.63■■□□□ 1.69
SSU72-201ENST00000291386 PTPRQQ9UMZ3 2332 aa25.62■■□□□ 1.69
SSU72-201ENST00000291386 A8MT66 165 aa25.62■■□□□ 1.69
SSU72-201ENST00000291386 K7ENP7 123 aa25.62■■□□□ 1.69
SSU72-201ENST00000291386 KATNA1O75449 491 aa25.62■■□□□ 1.69
SSU72-201ENST00000291386 SIX3O95343 332 aaPredicted RBP25.62■■□□□ 1.69
SSU72-201ENST00000291386 MED26O95402 600 aa25.62■■□□□ 1.69
SSU72-201ENST00000291386 ITGAXP20702 1163 aa25.62■■□□□ 1.69
SSU72-201ENST00000291386 F8A1P23610 371 aa25.62■■□□□ 1.69
SSU72-201ENST00000291386 IRF8Q02556 426 aa25.62■■□□□ 1.69
SSU72-201ENST00000291386 CHIT1Q13231 466 aa25.62■■□□□ 1.69
SSU72-201ENST00000291386 DOC2AQ14183 400 aa25.62■■□□□ 1.69
SSU72-201ENST00000291386 SLBPQ14493 270 aaKnown RBP eCLIP25.62■■□□□ 1.69
SSU72-201ENST00000291386 CCDC153Q494R4 210 aa25.62■■□□□ 1.69
SSU72-201ENST00000291386 XKR6Q5GH73 641 aa25.62■■□□□ 1.69
SSU72-201ENST00000291386 C1orf189Q5VU69 101 aa25.62■■□□□ 1.69
SSU72-201ENST00000291386 INO80CQ6PI98 192 aaPredicted RBP25.62■■□□□ 1.69
SSU72-201ENST00000291386 LRIG3Q6UXM1 1119 aa25.62■■□□□ 1.69
SSU72-201ENST00000291386 CROCCP2Q86T23 111 aa25.62■■□□□ 1.69
SSU72-201ENST00000291386 ANKRD53Q8N9V6 530 aa25.62■■□□□ 1.69
SSU72-201ENST00000291386 TRPV3Q8NET8 790 aa25.62■■□□□ 1.69
SSU72-201ENST00000291386 TTLQ8NG68 377 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms