RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 ANKRD27Q96NW4 1050 aa21.2■□□□□ 0.98
CCDC7-201ENST00000277657 PRAP1Q96NZ9 151 aa21.2■□□□□ 0.98
CCDC7-201ENST00000277657 TACO1Q9BSH4 297 aaKnown RBP21.2■□□□□ 0.98
CCDC7-201ENST00000277657 TPSD1Q9BZJ3 242 aa21.2■□□□□ 0.98
CCDC7-201ENST00000277657 KCNH6Q9H252 994 aa21.2■□□□□ 0.98
CCDC7-201ENST00000277657 CHRDQ9H2X0 955 aa21.2■□□□□ 0.98
CCDC7-201ENST00000277657 OR51B5Q9H339 312 aa21.2■□□□□ 0.98
CCDC7-201ENST00000277657 ZNF624Q9P2J8 865 aaPredicted RBP21.2■□□□□ 0.98
CCDC7-201ENST00000277657 C15orf41Q9Y2V0 281 aa21.2■□□□□ 0.98
CCDC7-201ENST00000277657 CROCCQ5TZA2 2017 aa21.19■□□□□ 0.98
CCDC7-201ENST00000277657 TRBV5-3A0A0A0MS03 114 aa21.19■□□□□ 0.98
CCDC7-201ENST00000277657 TCRBV3S1A0A5B6 114 aa21.19■□□□□ 0.98
CCDC7-201ENST00000277657 SERPINB1P30740 379 aa21.19■□□□□ 0.98
CCDC7-201ENST00000277657 HNRNPFP52597 415 aaKnown RBP21.19■□□□□ 0.98
CCDC7-201ENST00000277657 PLIN5Q00G26 463 aa21.19■□□□□ 0.98
CCDC7-201ENST00000277657 RHDQ02161 417 aa21.19■□□□□ 0.98
CCDC7-201ENST00000277657 SRSF11Q05519 484 aaKnown RBP21.19■□□□□ 0.98
CCDC7-201ENST00000277657 RBBP5Q15291 538 aaKnown RBP21.19■□□□□ 0.98
CCDC7-201ENST00000277657 FXNQ16595 210 aa21.19■□□□□ 0.98
CCDC7-201ENST00000277657 LRIF1Q5T3J3 769 aa21.19■□□□□ 0.98
CCDC7-201ENST00000277657 COMMD6Q7Z4G1 85 aa21.19■□□□□ 0.98
CCDC7-201ENST00000277657 MSRB3Q8IXL7 192 aa21.19■□□□□ 0.98
CCDC7-201ENST00000277657 METTL4Q8N3J2 472 aa21.19■□□□□ 0.98
CCDC7-201ENST00000277657 DEFB123Q8N688 67 aa21.19■□□□□ 0.98
CCDC7-201ENST00000277657 ANKRD53Q8N9V6 530 aa21.19■□□□□ 0.98
CCDC7-201ENST00000277657 STARD8Q92502 1023 aa21.19■□□□□ 0.98
CCDC7-201ENST00000277657 GFM2Q969S9 779 aaKnown RBP21.19■□□□□ 0.98
CCDC7-201ENST00000277657 MUC13Q9H3R2 512 aa21.19■□□□□ 0.98
CCDC7-201ENST00000277657 RMND5AQ9H871 391 aa21.19■□□□□ 0.98
CCDC7-201ENST00000277657 MAPRE3Q9UPY8 281 aa21.19■□□□□ 0.98
CCDC7-201ENST00000277657 IGKV1-8A0A0C4DH67 115 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 AKAP10O43572 662 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 PCDH7O60245 1069 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 DFNA5O60443 496 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 ERN1O75460 977 aaKnown RBP21.18■□□□□ 0.98
CCDC7-201ENST00000277657 TBX6O95947 436 aaPredicted RBP21.18■□□□□ 0.98
CCDC7-201ENST00000277657 KIR3DL1P43629 444 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 CSNK1G2P78368 415 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 PGS1Q32NB8 556 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 GPR180Q86V85 440 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 SIX5Q8N196 739 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 FAM160A2Q8N612 972 aaPredicted RBP21.18■□□□□ 0.98
CCDC7-201ENST00000277657 OR8J2Q8NGG1 315 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.18■□□□□ 0.98
CCDC7-201ENST00000277657 DUS3LQ96G46 650 aaKnown RBP21.18■□□□□ 0.98
CCDC7-201ENST00000277657 ITCHQ96J02 903 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 PAIP1Q9H074 479 aaKnown RBP21.18■□□□□ 0.98
CCDC7-201ENST00000277657 PRM3Q9NNZ6 103 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 SLC25A37Q9NYZ2 338 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 ACTR3BQ9P1U1 418 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 HEATR5BQ9P2D3 2071 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 A0A096LPI6 279 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 SPTY2D1-AS1A0A0U1RR47 76 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 TNFP01375 233 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 F3P13726 295 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 HOXB9P17482 250 aaPredicted RBP21.18■□□□□ 0.98
CCDC7-201ENST00000277657 SELPLGQ14242 412 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 TCEA2Q15560 299 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 LCN8Q6JVE9 175 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 PHACTR4Q8IZ21 702 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 GPBAR1Q8TDU6 330 aa21.18■□□□□ 0.98
CCDC7-201ENST00000277657 RSRC1Q96IZ7 334 aaKnown RBP21.18■□□□□ 0.98
CCDC7-201ENST00000277657 KCTD14Q9BQ13 255 aaPredicted RBP21.18■□□□□ 0.98
CCDC7-201ENST00000277657 ANKDD1BA6NHY2 528 aa21.17■□□□□ 0.98
CCDC7-201ENST00000277657 SCAMP2O15127 329 aaKnown RBP21.17■□□□□ 0.98
CCDC7-201ENST00000277657 STAMBPO95630 424 aa21.17■□□□□ 0.98
CCDC7-201ENST00000277657 ATP6V1B2P21281 511 aa21.17■□□□□ 0.98
CCDC7-201ENST00000277657 HTR1EP28566 365 aa21.17■□□□□ 0.98
CCDC7-201ENST00000277657 PTPN6P29350 595 aa21.17■□□□□ 0.98
CCDC7-201ENST00000277657 PEBP1P30086 187 aaKnown RBP21.17■□□□□ 0.98
CCDC7-201ENST00000277657 SHMT2P34897 504 aa21.17■□□□□ 0.98
CCDC7-201ENST00000277657 MTPNP58546 118 aa21.17■□□□□ 0.98
CCDC7-201ENST00000277657 ABATP80404 500 aa21.17■□□□□ 0.98
CCDC7-201ENST00000277657 EIF2B5Q13144 721 aaKnown RBP21.17■□□□□ 0.98
CCDC7-201ENST00000277657 CYP2R1Q6VVX0 501 aa21.17■□□□□ 0.98
CCDC7-201ENST00000277657 CAMKMTQ7Z624 323 aa21.17■□□□□ 0.98
CCDC7-201ENST00000277657 OR7A2PQ8NGA2 310 aa21.17■□□□□ 0.98
CCDC7-201ENST00000277657 FAM174AQ8TBP5 190 aa21.17■□□□□ 0.98
CCDC7-201ENST00000277657 REXO4Q9GZR2 422 aaKnown RBP21.17■□□□□ 0.98
CCDC7-201ENST00000277657 OR6C2Q9NZP2 312 aa21.17■□□□□ 0.98
CCDC7-201ENST00000277657 LRRC42Q9Y546 428 aa21.17■□□□□ 0.98
CCDC7-201ENST00000277657 PLXND1Q9Y4D7 1925 aa21.17■□□□□ 0.98
CCDC7-201ENST00000277657 FANCMQ8IYD8 2048 aa21.17■□□□□ 0.98
CCDC7-201ENST00000277657 PRSS51A0A1B0GVH4 220 aa21.16■□□□□ 0.98
CCDC7-201ENST00000277657 GNG14A0A1W2PPG7 69 aa21.16■□□□□ 0.98
CCDC7-201ENST00000277657 SCN2BO60939 215 aa21.16■□□□□ 0.98
CCDC7-201ENST00000277657 THEGLP0DJG4 465 aa21.16■□□□□ 0.98
CCDC7-201ENST00000277657 SLC19A1P41440 591 aa21.16■□□□□ 0.98
CCDC7-201ENST00000277657 WNT3P56703 355 aa21.16■□□□□ 0.98
CCDC7-201ENST00000277657 ZNF763Q0D2J5 394 aa21.16■□□□□ 0.98
CCDC7-201ENST00000277657 ILF3Q12906 894 aaKnown RBP eCLIP21.16■□□□□ 0.98
CCDC7-201ENST00000277657 FZD2Q14332 565 aa21.16■□□□□ 0.98
CCDC7-201ENST00000277657 RUNDC3AQ59EK9 446 aa21.16■□□□□ 0.98
CCDC7-201ENST00000277657 OR4F3Q6IEY1 312 aa21.16■□□□□ 0.98
CCDC7-201ENST00000277657 WDR48Q8TAF3 677 aa21.16■□□□□ 0.98
CCDC7-201ENST00000277657 MS4A8Q9BY19 250 aa21.16■□□□□ 0.98
CCDC7-201ENST00000277657 SLC6A13Q9NSD5 602 aa21.16■□□□□ 0.98
CCDC7-201ENST00000277657 C6orf203Q9P0P8 240 aaPredicted RBP21.16■□□□□ 0.98
CCDC7-201ENST00000277657 EGFL7Q9UHF1 273 aa21.16■□□□□ 0.98
CCDC7-201ENST00000277657 PCDHB14Q9Y5E9 798 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms