RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 SDR39U1Q9NRG7 319 aaPredicted RBP8.94□□□□□ -0.98
PDGFC-201ENST00000274071 ZNF222Q9UK12 451 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 NDRG2Q9UN36 371 aaKnown RBP8.94□□□□□ -0.98
PDGFC-201ENST00000274071 CMAHPQ9Y471 501 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 PTGDR2Q9Y5Y4 395 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 ZCWPW2A0A1B0GU75 182 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 SIGLEC5O15389 551 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 C4BPAP04003 597 aaKnown RBP8.94□□□□□ -0.98
PDGFC-201ENST00000274071 ADRB1P08588 477 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 CD63P08962 238 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 SLC10A3P09131 477 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 TSPAN19P0C672 248 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 APEHP13798 732 aaKnown RBP8.94□□□□□ -0.98
PDGFC-201ENST00000274071 TPH1P17752 444 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 RIDAP52758 137 aaKnown RBP8.94□□□□□ -0.98
PDGFC-201ENST00000274071 SIGLEC14Q08ET2 396 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 SERTAD2Q14140 314 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 EMC2Q15006 297 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 TRAM2Q15035 370 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 ZNF792Q3KQV3 632 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 ARHGAP17Q68EM7 881 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 EIF3MQ7L2H7 374 aaKnown RBP8.94□□□□□ -0.98
PDGFC-201ENST00000274071 ADHFE1Q8IWW8 467 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 ENTHD1Q8IYW4 607 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 OR1M1Q8NGA1 313 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 CNPPD1Q9BV87 410 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 ASPNQ9BXN1 380 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 KCNH6Q9H252 994 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 ACTR8Q9H981 624 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 MYOZ2Q9NPC6 264 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 RGS18Q9NS28 235 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 SLCO1C1Q9NYB5 712 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 ERVW-1Q9UQF0 538 aa8.94□□□□□ -0.98
PDGFC-201ENST00000274071 IGLV3-22A0A075B6J6 115 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 H3BM21 787 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 GTPBP1O00178 669 aaKnown RBP8.93□□□□□ -0.98
PDGFC-201ENST00000274071 C1RP00736 705 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 HOXA6P31267 233 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 WNT7BP56706 349 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 OLIG2Q13516 323 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 RPS6KA2Q15349 733 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 PRAMEF19Q5SWL8 479 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 LDLRAD1Q5T700 205 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 SLC39A4Q6P5W5 647 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 DLEU7Q6UYE1 221 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 RBMS3Q6XE24 437 aaKnown RBP8.93□□□□□ -0.98
PDGFC-201ENST00000274071 NLRC3Q7RTR2 1065 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 ATCAYQ86WG3 371 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 HIPK1Q86Z02 1210 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 CHPFQ8IZ52 775 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 LPCAT1Q8NF37 534 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 CHURC1Q8WUH1 139 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 MTERF3Q96E29 417 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 DIRAS2Q96HU8 199 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 ZBED3Q96IU2 234 aaPredicted RBP8.93□□□□□ -0.98
PDGFC-201ENST00000274071 GPR22Q99680 433 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 FAM213AQ9BRX8 229 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 TRMOQ9BU70 441 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 HTATIP2Q9BUP3 242 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 MIXL1Q9H2W2 232 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 OLA1Q9NTK5 396 aaKnown RBP8.93□□□□□ -0.98
PDGFC-201ENST00000274071 SPHK1Q9NYA1 384 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 A0A1B0GV90 55 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 FAM170BA6NMN3 283 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 LYRM1O43325 122 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 PRKRAO75569 313 aaKnown RBP8.93□□□□□ -0.98
PDGFC-201ENST00000274071 PRF1P14222 555 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 SYN1P17600 705 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 PAMP19021 973 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 GGT1P19440 569 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 DAPP51397 102 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 RORCP51449 518 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 PLK1P53350 603 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 ALKBH1Q13686 389 aaKnown RBP8.93□□□□□ -0.98
PDGFC-201ENST00000274071 KLHL22Q53GT1 634 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 MZT2BQ6NZ67 158 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 FUT10Q6P4F1 479 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 C19orf48Q6RUI8 117 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 TMEM107Q6UX40 140 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 USP53Q70EK8 1073 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 CEP68Q76N32 757 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 LRRC8DQ7L1W4 858 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 DET1Q7L5Y6 550 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 RAB11FIP2Q7L804 512 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 CDKL3Q8IVW4 592 aaPredicted RBP8.93□□□□□ -0.98
PDGFC-201ENST00000274071 TTC29Q8NA56 475 aaPredicted RBP8.93□□□□□ -0.98
PDGFC-201ENST00000274071 IL17RCQ8NAC3 791 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 C19orf18Q8NEA5 215 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 ADAMTS14Q8WXS8 1223 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 ISG20Q96AZ6 181 aaKnown RBP8.93□□□□□ -0.98
PDGFC-201ENST00000274071 LRRC46Q96FV0 321 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 MYOCQ99972 504 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 CMSS1Q9BQ75 279 aaKnown RBP8.93□□□□□ -0.98
PDGFC-201ENST00000274071 WDR18Q9BV38 432 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 GLIS2Q9BZE0 524 aaPredicted RBP8.93□□□□□ -0.98
PDGFC-201ENST00000274071 BTBD1Q9H0C5 482 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 MED28Q9H204 178 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 ST6GALNAC4Q9H4F1 302 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 SNTG1Q9NSN8 517 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 LIMD1Q9UGP4 676 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms