RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 RPIAP49247 311 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 ARPC4P59998 168 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 CTXN3Q4LDR2 81 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 ADNP2Q6IQ32 1131 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 TRIM46Q7Z4K8 759 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 FAM124AQ86V42 546 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 TMEM203Q969S6 136 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 SIGLEC11Q96RL6 698 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 TMEM121BQ9BXQ6 578 aaPredicted RBP12.48□□□□□ -0.41
COL8A1-202ENST00000273342 FZD4Q9ULV1 537 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 SLC22A14Q9Y267 594 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 RGS13O14921 159 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 SUV39H1O43463 412 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 CELF2O95319 508 aaKnown RBP12.48□□□□□ -0.41
COL8A1-202ENST00000273342 GJB5O95377 273 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 CLDN7O95471 211 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 GBAP04062 536 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 IFI30P13284 250 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 UGT2B10P36537 528 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 CPT1AP50416 773 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 TBCEQ15813 527 aaPredicted RBP12.48□□□□□ -0.41
COL8A1-202ENST00000273342 CLPPQ16740 277 aaPredicted RBP12.48□□□□□ -0.41
COL8A1-202ENST00000273342 ZXDCQ2QGD7 858 aaPredicted RBP12.48□□□□□ -0.41
COL8A1-202ENST00000273342 FAM180BQ6P0A1 224 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 TUBA3EQ6PEY2 450 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 PAMR1Q6UXH9 720 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 BCDIN3DQ7Z5W3 292 aaKnown RBP12.48□□□□□ -0.41
COL8A1-202ENST00000273342 ZSWIM9Q86XI8 627 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 OR10G2Q8NGC3 310 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 NELL1Q92832 810 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 OR2A14Q96R47 310 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 GABARAPL1Q9H0R8 117 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 ZNF226Q9NYT6 803 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 CRLS1Q9UJA2 301 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 NINQ8N4C6 2090 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 EPORP19235 508 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 RPS19P39019 145 aaKnown RBP12.48□□□□□ -0.41
COL8A1-202ENST00000273342 CRATP43155 626 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 CLCN4P51793 760 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 CRYBA2P53672 197 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 SNRPD2P62316 118 aaKnown RBP12.48□□□□□ -0.41
COL8A1-202ENST00000273342 CACNG1Q06432 222 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 DUSP4Q13115 394 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 PPIGQ13427 754 aaKnown RBP eCLIP12.48□□□□□ -0.41
COL8A1-202ENST00000273342 LRRC73Q5JTD7 316 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 RFPL4BQ6ZWI9 263 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 NLRP8Q86W28 1048 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 RAB43Q86YS6 212 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 REM2Q8IYK8 340 aaPredicted RBP12.48□□□□□ -0.41
COL8A1-202ENST00000273342 ZBTB2Q8N680 514 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 MS4A4AQ96JQ5 239 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 KATNAL1Q9BW62 490 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 TPT1P8Q9HAU6 139 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 CCDC177Q9NQR7 707 aaPredicted RBP12.48□□□□□ -0.41
COL8A1-202ENST00000273342 ABCB8Q9NUT2 735 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 IL17CQ9P0M4 197 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 OARD1Q9Y530 152 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 USP34Q70CQ2 3546 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 MEIOCA2RUB1 952 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 PCDH7O60245 1069 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 GPX5O75715 221 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 EBLN1P0CF75 366 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 DGKAP23743 735 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 GGT2P36268 569 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 MAPKAPK2P49137 400 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 PURAQ00577 322 aaKnown RBP12.47□□□□□ -0.41
COL8A1-202ENST00000273342 DSC3Q14574 896 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 CDK10Q15131 360 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 NOXRED1Q6NXP6 359 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 EIF3MQ7L2H7 374 aaKnown RBP12.47□□□□□ -0.41
COL8A1-202ENST00000273342 GLCCI1Q86VQ1 547 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 NAGSQ8N159 534 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 GPR156Q8NFN8 814 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 OR7G1Q8NGA0 311 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 OR52E4Q8NGH9 312 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 RPRD1BQ9NQG5 326 aaKnown RBP12.47□□□□□ -0.41
COL8A1-202ENST00000273342 TMEM45AQ9NWC5 275 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 SH3BP4Q9P0V3 963 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 ERVW-1Q9UQF0 538 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.47□□□□□ -0.41
COL8A1-202ENST00000273342 A0A0C4DFX4 3053 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 A0A1W2PQ09 198 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 NT5C1B-RDH14C9J2C7 533 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 MEN1O00255 615 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 ARHGAP33O14559 1287 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 LRRTM2O43300 516 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 CR2P20023 1033 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 RFX2P48378 723 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 ZNF177Q13360 481 aaPredicted RBP12.47□□□□□ -0.41
COL8A1-202ENST00000273342 E2F2Q14209 437 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 STARD3Q14849 445 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 UGT8Q16880 541 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 EXOC3L2Q2M3D2 409 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 MFSD14CQ5VZR4 134 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 FAHD1Q6P587 224 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 CBLL1Q75N03 491 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 ZNF467Q7Z7K2 595 aaPredicted RBP12.47□□□□□ -0.41
COL8A1-202ENST00000273342 LGI4Q8N135 537 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 CAMKK1Q8N5S9 505 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 COQ8BQ96D53 544 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms