RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 SLC32A1Q9H598 525 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 TM9SF3Q9HD45 589 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 AGPAT4Q9NRZ5 378 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 ABCB8Q9NUT2 735 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 FLRT1Q9NZU1 646 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 MBD2Q9UBB5 411 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 PCDHGA11Q9Y5H2 935 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 TCRBV3S1A0A5B6 114 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 KIAA0513O60268 411 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 PRPS1L1P21108 318 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 GADD45AP24522 165 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 HNRNPA0Q13151 305 aaKnown RBP11.21□□□□□ -0.61
VPS33A-201ENST00000267199 SCARB2Q14108 478 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 CRB2Q5IJ48 1285 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 LIN54Q6MZP7 749 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 HACD2Q6Y1H2 254 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 MARCH9Q86YJ5 346 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 KLHL6Q8WZ60 621 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 ARMC5Q96C12 935 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 WRAP53Q9BUR4 548 aaKnown RBP11.21□□□□□ -0.61
VPS33A-201ENST00000267199 POPDC3Q9HBV1 291 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 IGSF5Q9NSI5 407 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 MAT2BQ9NZL9 334 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 POU2F3Q9UKI9 436 aa11.21□□□□□ -0.61
VPS33A-201ENST00000267199 TLX2O43763 284 aaPredicted RBP11.21□□□□□ -0.62
VPS33A-201ENST00000267199 HTR2BP41595 481 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 SSR2P43308 183 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 XKP51811 444 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 RHAGQ02094 409 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 PUDPQ08623 228 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 C9orf64Q5T6V5 341 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 PSAPL1Q6NUJ1 521 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 Q6ZNX1 250 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 VTCN1Q7Z7D3 282 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 SERINC5Q86VE9 423 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 C17orf64Q86WR6 236 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 C3orf58Q8NDZ4 430 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 TSPEARQ8WU66 669 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 ZNF486Q96H40 463 aaPredicted RBP11.21□□□□□ -0.62
VPS33A-201ENST00000267199 RDH8Q9NYR8 311 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 RGS17Q9UGC6 210 aaPredicted RBP11.21□□□□□ -0.62
VPS33A-201ENST00000267199 POFUT2Q9Y2G5 429 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 ISM1B1AKI9 464 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 ZNF701M0R085 212 aaPredicted RBP11.21□□□□□ -0.62
VPS33A-201ENST00000267199 KDELR3O43731 214 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 DNTTP04053 509 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 ATF6P18850 670 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 MAGEA3P43357 314 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 AP2S1P53680 142 aaPredicted RBP11.21□□□□□ -0.62
VPS33A-201ENST00000267199 ZNF181Q2M3W8 571 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 PLA2G4EQ3MJ16 856 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 SLC36A3Q495N2 470 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 MED27Q6P2C8 311 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 PGBD2Q6P3X8 592 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 C1orf52Q8N6N3 182 aaKnown RBP11.21□□□□□ -0.62
VPS33A-201ENST00000267199 CRELD1Q96HD1 420 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 PPP1R16AQ96I34 528 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 ZNF382Q96SR6 550 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 DPH2Q9BQC3 489 aaPredicted RBP11.21□□□□□ -0.62
VPS33A-201ENST00000267199 TMED9Q9BVK6 235 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 FAIM2Q9BWQ8 316 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 OR2B2Q9GZK3 357 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 OR51V1Q9H2C8 321 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 IL1RAPQ9NPH3 570 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 NECTIN3Q9NQS3 549 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 TAS2R7Q9NYW3 318 aa11.21□□□□□ -0.62
VPS33A-201ENST00000267199 TRAV6A0A075B6T7 132 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 HMX2A2RU54 273 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 GJB5O95377 273 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 GKP32189 559 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 SLC11A1P49279 550 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 CLCN4P51793 760 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 PON2Q15165 354 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 DPY19L1Q2PZI1 675 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 PTCHD3Q3KNS1 767 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 FRG2Q64ET8 278 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 ING5Q8WYH8 240 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 MSANTD3Q96H12 275 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 FRG2BQ96QU4 278 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 MGLLQ99685 303 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 MAN2B2Q9Y2E5 1009 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 YIPF1Q9Y548 306 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 TRBC2A0A5B9 178 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 MBLAC1A4D2B0 266 aaPredicted RBP11.2□□□□□ -0.62
VPS33A-201ENST00000267199 MANBAO00462 879 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 EEDO75530 441 aaKnown RBP11.2□□□□□ -0.62
VPS33A-201ENST00000267199 CH25HO95992 272 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 FDXRP22570 491 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 PPP2R2BQ00005 443 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 RGL4Q8IZJ4 473 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 TCEANCQ8N8B7 351 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 OR10H4Q8NGA5 316 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 ZNF431Q8TF32 576 aaPredicted RBP11.2□□□□□ -0.62
VPS33A-201ENST00000267199 TNFAIP8L1Q8WVP5 186 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 PEX13Q92968 403 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 PTERQ96BW5 349 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 PTPN18Q99952 460 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 GAL3ST1Q99999 423 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 SUV39H2Q9H5I1 410 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 ZDHHC3Q9NYG2 299 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms