RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 CDKN1CP49918 316 aaPredicted RBP10.87□□□□□ -0.67
CHFR-201ENST00000266880 ZNF648Q5T619 568 aaPredicted RBP10.87□□□□□ -0.67
CHFR-201ENST00000266880 P2RY11Q96G91 374 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 ACSL5Q9ULC5 683 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 LOC100130705A0A1B0GUX0 176 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 A0A1W2PQ67 120 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 NMBRP28336 390 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 SMSP52788 366 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 ST3GAL4Q11206 333 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 MRPL41Q8IXM3 137 aaKnown RBP10.87□□□□□ -0.67
CHFR-201ENST00000266880 DPF1Q92782 380 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 ZNF701Q9NV72 531 aaPredicted RBP10.87□□□□□ -0.67
CHFR-201ENST00000266880 WASF3Q9UPY6 502 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 HMX3A6NHT5 357 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 NPHS1O60500 1241 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 CSTBP04080 98 aaKnown RBP10.87□□□□□ -0.67
CHFR-201ENST00000266880 LSSP48449 732 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 ANKRD22Q5VYY1 191 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 FSTL4Q6MZW2 842 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 ZNF619Q8N2I2 560 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 FANK1Q8TC84 345 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 TMEM98Q9Y2Y6 226 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 CCDC88AQ3V6T2 1871 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 TLX2O43763 284 aaPredicted RBP10.87□□□□□ -0.67
CHFR-201ENST00000266880 ELK4P28324 431 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 MAP2K3P46734 347 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 REPS2Q8NFH8 660 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 FAM151AQ8WW52 585 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 GBA3Q9H227 469 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 MKKSQ9NPJ1 570 aaPredicted RBP10.87□□□□□ -0.67
CHFR-201ENST00000266880 YDJCA8MPS7 323 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 BRINP1O60477 761 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 TAGLNQ01995 201 aaKnown RBP10.87□□□□□ -0.67
CHFR-201ENST00000266880 PAPD4Q6PIY7 484 aaKnown RBP10.87□□□□□ -0.67
CHFR-201ENST00000266880 DPY19L4Q7Z388 723 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 OR5AK3PQ8NH89 298 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 NR4A3Q92570 626 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 BORCS7Q96B45 105 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 INPP4AQ96PE3 977 aaPredicted RBP10.87□□□□□ -0.67
CHFR-201ENST00000266880 LRRC3Q9BY71 257 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 FLRT1Q9NZU1 646 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 CHD2O14647 1828 aaKnown RBP10.87□□□□□ -0.67
CHFR-201ENST00000266880 E9PI62 339 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 CCKBRP32239 447 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 PPP1R8Q12972 351 aaKnown RBP10.87□□□□□ -0.67
CHFR-201ENST00000266880 NDRG1Q92597 394 aaKnown RBP10.87□□□□□ -0.67
CHFR-201ENST00000266880 LRRC58Q96CX6 371 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 TGIF2Q9GZN2 237 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 TBC1D3DA0A087WVF3 549 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 TBC1D3IA0A087WXS9 549 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 TBC1D3EA0A087X179 549 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 TBC1D3KA0A087X1G2 549 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 TBC1D3FA6NER0 549 aaPredicted RBP10.87□□□□□ -0.67
CHFR-201ENST00000266880 TBC1D3LB9A6J9 549 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 TBC1D3HP0C7X1 549 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 ENGP17813 658 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 AMY2BP19961 511 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 PRMT2P55345 433 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 TMEM69Q5SWH9 247 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 TBC1D3GQ6DHY5 549 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 TBC1D3CQ6IPX1 549 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 ZNF584Q8IVC4 421 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 TBC1D3Q8IZP1 549 aaPredicted RBP10.87□□□□□ -0.67
CHFR-201ENST00000266880 NINJ1Q92982 152 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 SCRN2Q96FV2 425 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 FAM83CQ9BQN1 747 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 CD84Q9UIB8 345 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 HACL1Q9UJ83 578 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 NPIPA5E9PKD4 350 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 ACKR2O00590 384 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 CHRNA4P43681 627 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 BTG3Q14201 252 aaPredicted RBP10.87□□□□□ -0.67
CHFR-201ENST00000266880 LAPTM4AQ15012 233 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 EARS2Q5JPH6 523 aaKnown RBP10.87□□□□□ -0.67
CHFR-201ENST00000266880 SAMD10Q9BYL1 202 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 NPIPA1Q9UND3 350 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 PCM1Q15154 2024 aa10.87□□□□□ -0.67
CHFR-201ENST00000266880 CLIC3O95833 236 aa10.86□□□□□ -0.67
CHFR-201ENST00000266880 SPAM1P38567 509 aa10.86□□□□□ -0.67
CHFR-201ENST00000266880 MRPS5P82675 430 aaKnown RBP10.86□□□□□ -0.67
CHFR-201ENST00000266880 MC2RQ01718 297 aa10.86□□□□□ -0.67
CHFR-201ENST00000266880 GPR68Q15743 365 aa10.86□□□□□ -0.67
CHFR-201ENST00000266880 ADGRD1Q6QNK2 874 aa10.86□□□□□ -0.67
CHFR-201ENST00000266880 ZFPM2Q8WW38 1151 aa10.86□□□□□ -0.67
CHFR-201ENST00000266880 ZNF175Q9Y473 711 aa10.86□□□□□ -0.67
CHFR-201ENST00000266880 ASTN1O14525 1302 aa10.86□□□□□ -0.67
CHFR-201ENST00000266880 A0A1W2PPK0 400 aa10.86□□□□□ -0.67
CHFR-201ENST00000266880 PCDH17O14917 1159 aa10.86□□□□□ -0.67
CHFR-201ENST00000266880 AGPAT2O15120 278 aa10.86□□□□□ -0.67
CHFR-201ENST00000266880 ABCB7O75027 752 aa10.86□□□□□ -0.67
CHFR-201ENST00000266880 MRPL3P09001 348 aaKnown RBP10.86□□□□□ -0.67
CHFR-201ENST00000266880 RORAP35398 523 aa10.86□□□□□ -0.67
CHFR-201ENST00000266880 ZNF136P52737 540 aa10.86□□□□□ -0.67
CHFR-201ENST00000266880 OR2T5Q6IEZ7 315 aa10.86□□□□□ -0.67
CHFR-201ENST00000266880 OR2T29Q8NH02 315 aa10.86□□□□□ -0.67
CHFR-201ENST00000266880 NFKBIDQ8NI38 313 aa10.86□□□□□ -0.67
CHFR-201ENST00000266880 OR2AG2A6NM03 316 aa10.86□□□□□ -0.67
CHFR-201ENST00000266880 SRPRAP08240 638 aaKnown RBP10.86□□□□□ -0.67
CHFR-201ENST00000266880 IDH3GP51553 393 aaPredicted RBP10.86□□□□□ -0.67
CHFR-201ENST00000266880 CDK18Q07002 472 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms