RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 PRSS38A1L453 326 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 HHEXQ03014 270 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 EIF4EBP2Q13542 120 aaPredicted RBP13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 VRK3Q8IV63 474 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 DNAJC5GQ8N7S2 189 aa13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 MKRN2Q9H000 416 aaKnown RBP13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 DNMT3AQ9Y6K1 912 aaPredicted RBP13.96□□□□□ -0.17
PDLIM2-201ENST00000265810 PRSS51A0A1B0GVH4 220 aa13.96□□□□□ -0.18
PDLIM2-201ENST00000265810 MGRN1O60291 552 aa13.96□□□□□ -0.18
PDLIM2-201ENST00000265810 SPIBQ01892 262 aa13.96□□□□□ -0.18
PDLIM2-201ENST00000265810 UAP1L1Q3KQV9 507 aa13.96□□□□□ -0.18
PDLIM2-201ENST00000265810 ZNF480Q8WV37 535 aa13.96□□□□□ -0.18
PDLIM2-201ENST00000265810 NEIL2Q969S2 332 aa13.96□□□□□ -0.18
PDLIM2-201ENST00000265810 ISL2Q96A47 359 aa13.96□□□□□ -0.18
PDLIM2-201ENST00000265810 SLC35A5Q9BS91 424 aa13.96□□□□□ -0.18
PDLIM2-201ENST00000265810 TRIM8Q9BZR9 551 aa13.96□□□□□ -0.18
PDLIM2-201ENST00000265810 SPATA7Q9P0W8 599 aa13.96□□□□□ -0.18
PDLIM2-201ENST00000265810 SUCOQ9UBS9 1254 aaKnown RBP13.96□□□□□ -0.18
PDLIM2-201ENST00000265810 KRT87PA6NCN2 255 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 ZNF860A6NHJ4 632 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 SERPINI2O75830 405 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 ARHGEF15O94989 841 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 C8orf89P0DMQ9 161 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 SERPINB1P30740 379 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 ACSL1P33121 698 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 GSK3BP49841 420 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 COPZ1P61923 177 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 ABATP80404 500 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 IER5LQ5T953 404 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 FBXO15Q8NCQ5 510 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 YIPF4Q9BSR8 244 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 NEU3Q9UQ49 428 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 CAPN5O15484 640 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 C1orf105O95561 183 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 DUOXA1Q1HG43 343 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 C10orf62Q5T681 223 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 SAMD14Q8IZD0 417 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 DNASE1L2Q92874 299 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 BATF3Q9NR55 127 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 GPR89AB7ZAQ6 455 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 MOSPD3O75425 235 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 GPR89BP0CG08 455 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 EEFSECP57772 596 aaKnown RBP13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 NEK5Q6P3R8 708 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 TMEFF1Q8IYR6 380 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 OR7G3Q8NG95 312 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 ANKRD27Q96NW4 1050 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 P2RY12Q9H244 342 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 PTBP2Q9UKA9 531 aaKnown RBP13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 FZD4Q9ULV1 537 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 AK5Q9Y6K8 562 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 ANKRD12Q6UB98 2062 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 HSD3B1P14060 373 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 HSD3B2P26439 372 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 FEN1P39748 380 aaKnown RBP13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 TPMTP51580 245 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 VSX2P58304 361 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 NFATC4Q14934 902 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 USP53Q70EK8 1073 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 OFCC1Q8IZS5 231 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 LRTOMTQ8WZ04 291 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 SLC35G5Q96KT7 338 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 MBNL1Q9NR56 388 aaKnown RBP13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 KRT84Q9NSB2 600 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 PCDHGA2Q9Y5H1 932 aa13.95□□□□□ -0.18
PDLIM2-201ENST00000265810 AP3D1O14617 1153 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 TIA1P31483 386 aaKnown RBP eCLIP13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 METAP1P53582 386 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 ZNF155Q12901 538 aaPredicted RBP13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 TMEM196Q5HYL7 178 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 ZC3H12BQ5HYM0 836 aaKnown RBP13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 CHCHD4Q8N4Q1 142 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 ZDHHC1Q8WTX9 485 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 RSPRY1Q96DX4 576 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 ASB9Q96DX5 294 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 EBF2Q9HAK2 575 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 GPRC5BQ9NZH0 403 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 SUSD2Q9UGT4 822 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 SERPINA1P01009 418 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 GPIP06744 558 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 MAGEA12P43365 314 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 IDH2P48735 452 aaKnown RBP13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 PGDP52209 483 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 DLX2Q07687 328 aaPredicted RBP13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 SBSNQ6UWP8 590 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 KCT2Q8NC54 265 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 AURKBQ96GD4 344 aaPredicted RBP13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 C3orf30Q96M34 536 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 VPS35Q96QK1 796 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 FAM129BQ96TA1 746 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 TPT1P8Q9HAU6 139 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 FAM120CQ9NX05 1096 aaKnown RBP13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 GPN3Q9UHW5 284 aaPredicted RBP13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 SIT1Q9Y3P8 196 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 C17orf113A0A1B0GUU1 675 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 CD160O95971 181 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 CISD3P0C7P0 127 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 YAP1P46937 504 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms